Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1149 |
Symbol | |
ID | 4439647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1152499 |
End bp | 1153443 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 639672987 |
Product | glycosyl transferase family protein |
Protein accession | YP_814957 |
Protein GI | 116629785 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000226054 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.000000000419037 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTATATG TTGAAATGGA TGGCCGGTGT GGTAATCAAT TATTTCATTA TGCCGTAGCA AGATATATTC AGCTCGCAAT TGGAAATAAA GAAAAACTAT GCTTAAATTT TAATAAAATT TTTGAAAAAA AAGATGAAAA TAATGGTTGG ATAGACTATT TAAAAGATTT TAAAACAGTT CCATACAGTT ATTATTCTAA ATCGGGAACT ATCCTAAAAA ATGAGTCAAA TTTCATTCAA AAGATCGCGA TTGGTTTAAA AGCAATTCAG ATTAAGAGCT TAACGAAAAA AAGTAGACAG GAACAAGCTG ATAAGGCTGA AGTTGGTCAA CGTACGTTAA ATAAATTAGG GGTTTATTGG GTAAGAGAAG GGGTTAATCA AATATATCCC TATAAAAATA ACAAAATTTT GGTATCAGGT ATATGCGAAT CAAATTTTAT ATATGAAATT CAAGAACAAT TACAAAAGGA ACTGATTCCA GTTACTCCAG TTAGCTCCCT TAACAAATCG CTTCTTGAAA AGATTGATAA TTGTAATTCA GTTTGTATTT CGGTTAGACG TGGCGACTTT TTTAATAATA AAAACGCAAA AAAATATGGA GTTTGTAGTC CTGAATATTA TATAAGAGCC AAAAAATATT TTGATAAAAA AAGACTTGAA AATACTGTAT ATTTTTGCTT TTCTGACGAT ATAGAATGGT GTAAAGAAAA TCTTAAATTT ACTGATAAAA ATGTTATTTT TGTGTCTCAA GAAATGCCAG TTTATGAAAC ATTAAGATTA ATGTCACGTT GTAAGCATTT TATTTTATCT AATTCAACAT TTTCATGGTG GGGTCAATTT TTATCTGAGT ATAAAGATAA AATTGTTGTA TCACCAGCTA GATGGAATAA TGATGGGTAT GATACTAATT TAATAGATAA AAATTGGATT TTAATTGATG CGTAA
|
Protein sequence | MLYVEMDGRC GNQLFHYAVA RYIQLAIGNK EKLCLNFNKI FEKKDENNGW IDYLKDFKTV PYSYYSKSGT ILKNESNFIQ KIAIGLKAIQ IKSLTKKSRQ EQADKAEVGQ RTLNKLGVYW VREGVNQIYP YKNNKILVSG ICESNFIYEI QEQLQKELIP VTPVSSLNKS LLEKIDNCNS VCISVRRGDF FNNKNAKKYG VCSPEYYIRA KKYFDKKRLE NTVYFCFSDD IEWCKENLKF TDKNVIFVSQ EMPVYETLRL MSRCKHFILS NSTFSWWGQF LSEYKDKIVV SPARWNNDGY DTNLIDKNWI LIDA
|
| |