Gene LGAS_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1111 
Symbol 
ID4439679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1116900 
End bp1117613 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content32% 
IMG OID639672951 
ProductSAM-dependent methyltransferase 
Protein accessionYP_814921 
Protein GI116629749 
COG category[R] General function prediction only 
COG ID[COG2384] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0101071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAT TTTTAGTAAG AGGTGAGAGT GTGTTAGAAG AAAGACTAGC TCAAATTGGT 
AAAATGGTAG ATCCTGAAAG CCGATTGGCT GATATTGGTA CTGATCATGC ATATTTACCA
ATTGCATTAG TAAAAGAAGG AAAAATAGAT TTTGCGATTG CAAGCGACGT TGCTGCAGGT
CCTTTGAATA ATGCAAAACA AGATATTGAA GAAGCAGGTT TAGAAGAAAA AATTGAAACA
AGATTGGGCT CTGGCTTAGC AACTTTAAGG ACAGAAGATC AAATTGATAC TGTCGTGATT
GCCGGTATGG GTGGAAAGCT AATGACTAAT CTTTTAGAGA CGGCATATCA AGAAGGAAAA
GCATACCCAA CATTAATTTT AGAAGCTAAT ATTGGTGAAC ATTTGGTTAG AAAATGGTTG
ATGGACCATC AATATGAAAT TGTAGCTGAG CAAATTATTG AAGTAGCTGG TCATATTTAT
GAAATAATTA AAGCTGTACA AGGAAAAAAT AAAGTTGAGC TTTCTGAAAA AGATTTAGTT
TTTGGCCCAT TTTTATTAAA GGAAAAGAAT CCTGTTTTTT TTAAAAAGTG GACTAATCAA
CTTAAGTACT ATCAAAATTT AAAAACCAAT TTAAATAAAG CTAAAAACAA AGATGAGGAT
AAGATAAACA AAATAAATGA CTTAATTAAA ATGATTGAGG AAGTGTTGAA ATGA
 
Protein sequence
MLKFLVRGES VLEERLAQIG KMVDPESRLA DIGTDHAYLP IALVKEGKID FAIASDVAAG 
PLNNAKQDIE EAGLEEKIET RLGSGLATLR TEDQIDTVVI AGMGGKLMTN LLETAYQEGK
AYPTLILEAN IGEHLVRKWL MDHQYEIVAE QIIEVAGHIY EIIKAVQGKN KVELSEKDLV
FGPFLLKEKN PVFFKKWTNQ LKYYQNLKTN LNKAKNKDED KINKINDLIK MIEEVLK