Gene LGAS_1098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1098 
Symbol 
ID4439701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1106233 
End bp1107261 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content33% 
IMG OID639672939 
Producthypothetical protein 
Protein accessionYP_814909 
Protein GI116629737 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0131403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTTAT CATTTTCAAT TGTATTAATT TTATTTTTAT TGGCTTTAGC AACCTTTGTT 
TGGGTATTGA CCCATGAAAG ACGTAGTCTG TGGTCAGGGA TGACGTTAGT TTGGACAATA
ATAACTTTCG GTCTAATCAC AGCAGTTAGC TTAATGATTG CCGCAGAAAT TTTCCCAATT
ACACATCAAT TTGTTCTGCT TGTTTTTGCT TTAATTTTAA TTGCATTGAT GGTTTTGGTC
TTTGCATTTA TTGCAATCTT AATAGTAATG TTTATTTATA ATGGAATTAA AATTTTAATT
CGGGAAGGTA ATCGTTGGAC TAACTTTTTA TCATTAGCAA TGGGAATTGG AATTATTGCT
TACTTATTCT TGTTCCCTAT AGTTGGACGA TTGACACGCA ATAATTTTGG TACTTACTTG
TATCTATTTG TTAATTTGAC CGTCATTTAC TTAATTTTTA TTATGATGAT GTATACTTTG
ACTTCATGGA TTAATCTGAT CAATTTTAAG ACTAAGAAAT TAAATTACAT CGTAGTTCTA
GGAGCTGGTT TAATTGGTAA AAAGGTGACA CCGCTGCTTG CGGCTAGAAT TAACCGTGGA
ATTGAGGTTT ATCGCAATAA TCCAGGTTCA AAAATTATTA TGTCAGGTGG ACAAGGACCA
GGGGAAGAAA TTCCAGAAGC AGTTGCAATG GCAAAATATG CCGAAGAAAA AGGAATCTCT
AACCAAGATA TTATTGTTGA AGATAAGTCA AAAACAACTA GACAAAACTT AGCTTTTTCG
CATAAGTTAA TGAAATCCAA TTCACGTTTT GCAATTGTAA CAAATTCTTA TCATGTGTAT
CGCGCATTAG TTTTAGCTAA AAGAATGGGG CTAGACTGTA TCGGTTATGG AGCTAAAACC
AAATGGTATT TCACTTTAAA TGCATTTGTG CGGGAATTTA TTGCTTATTT AACGATTACT
TGGCGTTTAC AGCTGAGTAT AGTTGGTTTT ATTGGCTTAG TTGTTTTATT AGGAGCTTTA
TTGAGGTAA
 
Protein sequence
MILSFSIVLI LFLLALATFV WVLTHERRSL WSGMTLVWTI ITFGLITAVS LMIAAEIFPI 
THQFVLLVFA LILIALMVLV FAFIAILIVM FIYNGIKILI REGNRWTNFL SLAMGIGIIA
YLFLFPIVGR LTRNNFGTYL YLFVNLTVIY LIFIMMMYTL TSWINLINFK TKKLNYIVVL
GAGLIGKKVT PLLAARINRG IEVYRNNPGS KIIMSGGQGP GEEIPEAVAM AKYAEEKGIS
NQDIIVEDKS KTTRQNLAFS HKLMKSNSRF AIVTNSYHVY RALVLAKRMG LDCIGYGAKT
KWYFTLNAFV REFIAYLTIT WRLQLSIVGF IGLVVLLGAL LR