| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1028 |
|---|
| Symbol | asnC |
|---|
| ID | 4439773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1030019 |
|---|
| End bp | 1031317 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639672871 |
|---|
| Product | asparaginyl-tRNA synthetase |
|---|
| Protein accession | YP_814841 |
|---|
| Protein GI | 116629669 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00241255 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 84 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAT TAATCTCAAT TAAAGATTCT TCTAAACATG TAGACCAAAA AGTTAAGATG
CATGTTTGGT TAACTGATAA ACGATCAAGT GGTAAGATTA TCTTCTTGCA ATTACGTGAT
GGAACTGCAT TTTTCCAAGG TGTTGTTCGT AAGAATGATG TTTCTGAAGA AGTTTTTGAA
GCAGCTAAGT CTTTACGTCA AGAAGCTAGT TTTTATATTA CTGGTACTGT TCACGAAGAT
AAGCGTTCTC ACTTCGGTTA TGAAATTCAA ATCTCAGATT TAGAAATTGT TTCTAATAAC
GAGGGCTACC CAATCGGTAA CAAGGAACAT GGTGTTGATT TCTTACTTGA TAACCGTCAC
TTATGGTTAA GATCTAAACG CCCATTTGCT ATTATGCAAA TTAGAAATAC TATGTTTAAA
GCTACTGTTG ACTTCTTTGA AAAAGAGGGC TTTATCAAGT TTGACGCGCC TATTTTCATG
CATTCAGCTC CAGAAGGTAC TACACAATTA TTCCATGTAG AATACTTTAA CAATGACGCA
TACTTGTCAC AATCTGGTCA ATTATACGGT GAAGCTGGCG CTATGGCTTA CGGCAAGATC
TTTACTTTTG GTCCAACTTT TAGAGCAGAA GAATCTAAAG GCCGTCGTCA TATGACAGAA
TTTTGGATGA TGGAACCAGA AATGGCATGG ATGCATCAAG ATGAATCTTT AGATATTCAA
GAAAGATACT TAGCATATAT GGTTAAGCAA GTTCTTGAAA ACAATGAATA TGAATTGAGA
ATCTTGGGTA GAGATCCTGA AAAATTACGT CCAACTACTG AAGGTAACTT TACTCGTCTT
CCTTACGATG ATGCTATTAA AATGCTTCAA GAAGCTGGTC GTGATATTAA ATGGGGTGAC
GACTTTGGTG CTCCAGATGA AGGATATATT TCAGAACAAT TTGATCGTCC AGTCTTCATC
GTTAACTATC CAACCACAAT TAAGCCTTTC TATATGAAGA AGAATCCTGA TAATCCTAAA
GAATACTTAT GTGCTGACGT AATTGCGCCA GAAGGATACG GTGAAATTTT TGGTGGTTCT
GAACGTGAAG GAAACTACGA AATTTTGAAA AAGCAAATTG AAGAAGCAGG ACTAAACTTA
GAAGATTACC AATGGTACCT TGACTTACGT AAATTTGGTG GTGTTCCTCA CTCTGGCTTT
GGTATGGGAT TTGAACGTAC GATTGCTTGG ATTTGTAAGT TAGATCATAT TCGTGAAGCT
ATTCCATTCC CAAGATTAAT TAACAGAATG CAACCATAA
|
|---|
| Protein sequence | MTELISIKDS SKHVDQKVKM HVWLTDKRSS GKIIFLQLRD GTAFFQGVVR KNDVSEEVFE
AAKSLRQEAS FYITGTVHED KRSHFGYEIQ ISDLEIVSNN EGYPIGNKEH GVDFLLDNRH
LWLRSKRPFA IMQIRNTMFK ATVDFFEKEG FIKFDAPIFM HSAPEGTTQL FHVEYFNNDA
YLSQSGQLYG EAGAMAYGKI FTFGPTFRAE ESKGRRHMTE FWMMEPEMAW MHQDESLDIQ
ERYLAYMVKQ VLENNEYELR ILGRDPEKLR PTTEGNFTRL PYDDAIKMLQ EAGRDIKWGD
DFGAPDEGYI SEQFDRPVFI VNYPTTIKPF YMKKNPDNPK EYLCADVIAP EGYGEIFGGS
EREGNYEILK KQIEEAGLNL EDYQWYLDLR KFGGVPHSGF GMGFERTIAW ICKLDHIREA
IPFPRLINRM QP
|
|---|
| |