Gene LGAS_1026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1026 
Symbol 
ID4439771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand- 
Start bp1028669 
End bp1029298 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content35% 
IMG OID639672869 
ProductEndoIII-related endonuclease 
Protein accessionYP_814839 
Protein GI116629667 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.744613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAT TATTGTCAGA CGAAAAAGCT CGATTAGTTT TAAAAAGAAT TTTGTCTCTT 
TATCCGGATG CAAAAGGAGA ACTTCACTGG GATACAAAGT TTCATTTGCT TTGTGCGGTT 
TTAATGAGTG CACAAACTAC TGATAAGATG GTTAATAAAA CAACACCTAA ATTTTTTAGT 
GACTATCCTG ATAGTGCTAG TTTAGCCCAA GCTAGTATTA AAGATATCGA AGCACATATT 
CACACGATTG GTTTGTATCG TACAAAGGCT AAGCATTTAA AGGAAACAGC ACAGATTATT 
ACAGATAAGT TTAATGGTGA AATTCCCAAG GATAAAAAGA CTTTAATGAC ACTACCAGGA 
GTAGGTGAGA AAACGGCTAA TGTTGTTTTG GCAGAAGGTT TTAAAATACC TGCAATTGCA 
GTTGATACTC ATGTATCTCG GATTTCTAAA AGATTTAAAA TAGTGGGAGA AAAAGCTACT 
CCGCATGAGG TAGAACAACG TCTTGAAGAG TTACTGCCAA AAGAAGAATG GATTCGTACA 
CATCATGCAA TGATTTTATT TGGTCGATAT ACAATGCCAG CTAGAACTAA AGATCAAGAT 
CCTTATTCTT TTTTACCACC TTTAAAGTGA
 
Protein sequence
MEKLLSDEKA RLVLKRILSL YPDAKGELHW DTKFHLLCAV LMSAQTTDKM VNKTTPKFFS 
DYPDSASLAQ ASIKDIEAHI HTIGLYRTKA KHLKETAQII TDKFNGEIPK DKKTLMTLPG 
VGEKTANVVL AEGFKIPAIA VDTHVSRISK RFKIVGEKAT PHEVEQRLEE LLPKEEWIRT 
HHAMILFGRY TMPARTKDQD PYSFLPPLK