| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0883 |
|---|
| Symbol | |
|---|
| ID | 4439890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 876429 |
|---|
| End bp | 877322 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639672739 |
|---|
| Product | RNA-binding protein |
|---|
| Protein accession | YP_814710 |
|---|
| Protein GI | 116629538 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2996] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.000000000000841553 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGGTG AAATAAGAAA AGGAAAAGTT ATTGATGAAA ATCAATCTGC TTTTTATGTA
CAGGTTGATG GCGTAACTTT TGAATTAAAA AAAATAGAAG TTACCCAAGA TGAACCAATC
CATTTAGGTG ACGAAGTACA GGGCTTTATC TATGAAAATA AAGATAAAAA GAAGGAAATG
ACACAATTCT ATCCTTTTGC TCAAAAAGAT CAGTATGGTT GGGCTACGGT AACTGAAGTG
CGTCGCGATT TGGGTGTATT TGTAGATATT GGATTAAATG ATAAAGATGT TGTTGTTTCT
TTAGATGATC TTCCGCTTGA AAAAGATCAA TGGCCAAAGA AAGATGATCG TTTATTGGTA
CGCCTTGAGA CTGATGATAA GGAACGTATT TGGGCTAAAA TGGCAGAAGA AGACGTTTTT
GAACAGTTAG CTGCCAATTT CCCAGCACAT TTGGAAAATA AAAATATGTC TGGTACTGTG
TACCGTAACT ATGAAGTTGG ATCTTTCGTA ATTACTGATC AATATTATTT AGCCTTTGTC
CATAAATCTG AAATGTTTCG TCCTTTGCGT CTAGGGCAAA AAATTAAAGC ACGCGTTATC
GGAGTTAGTC AATATGGTAG ATTGAATTTG AGCGTTCTGC CTCGAGGGTT TGAGGAGATT
GATGATGATG CTCAAATGAT TTTGGTAAGT TTACGTCGCG AGGCAACTAA GACTTTGCCT
TTTTATGATA AAAGCGACGC CCAAGAAATT AAGAATCACT TTGGCATCTC TAAGTCAGCC
TTTAAGCGTG CTTTAGGTCA TTTGTTAAAA AATAAATTAA TTACTGAAGA TAAAGATGCA
GGAACAATTA GTTTGGTAGA AAAAGATGAA TCAGACACAG ACGATGAAGG ATAA
|
|---|
| Protein sequence | MLGEIRKGKV IDENQSAFYV QVDGVTFELK KIEVTQDEPI HLGDEVQGFI YENKDKKKEM
TQFYPFAQKD QYGWATVTEV RRDLGVFVDI GLNDKDVVVS LDDLPLEKDQ WPKKDDRLLV
RLETDDKERI WAKMAEEDVF EQLAANFPAH LENKNMSGTV YRNYEVGSFV ITDQYYLAFV
HKSEMFRPLR LGQKIKARVI GVSQYGRLNL SVLPRGFEEI DDDAQMILVS LRREATKTLP
FYDKSDAQEI KNHFGISKSA FKRALGHLLK NKLITEDKDA GTISLVEKDE SDTDDEG
|
|---|
| |