| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0809 |
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| Symbol | |
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| ID | 4439988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 788897 |
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| End bp | 793195 |
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| Gene Length | 4299 bp |
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| Protein Length | 1432 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639672666 |
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| Product | DNA polymerase III, alpha subunit ( type) |
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| Protein accession | YP_814638 |
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| Protein GI | 116629466 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01405] DNA polymerase III, alpha chain, Gram-positive type
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.00164061 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCAAATA AAAACGAACT TTTCAAAAAA CTATTAGATC AAATCAAGTT TCCTGATAAG
TTTGAAGATA ACGATATTGT CCAAAATGGT GAAATTGAAA ACGTGGATGT ATACGCTAAT
GAAAGAAAGT GGAAAATCCA CGTTTTTTTT GATACACCAC TAGATTTTGA AACTTATCGT
TCTCTTAATG AACTTATTCA TCAGACATTT GAACCTTTTG TGAATGTTGA ATTAATAGTC
CGGACCAAGG ATGGAAGTAG TAAGAATTTA CCAGAATATT GGACATATGC AATTCAAAAT
TCGACTAATT TGAAACCTGC AGTTCGGGAA TTTTTACAAG GACAAGCCCC ATATTTAGAA
AAAGAAAAAT GGTTGATTCC AACTCAAAAC AATGTTGTGA ATGGGCTTCT TTCCGAGCAA
GTTTTAGCAG AACTTAATAG TGAATTTAGA AGATATGGCT TTTTTAATAT CAAGTTTACT
ACCAAGGTCG ATGAAACAAA TATTGATGAA AATCTAAAAA GCTTAGAACA AGTGCAGGCT
CAACATGAAT CAGCAATGCA AGAATTCTAT GAAAAACAAC CTGCTGAACC TAAGAAAAAG
ATGCCTGTTA AAAGTACAAG AATGGGTAGT AATAAAGTTG ATAAAAAGGC TAAGTTTATT
CAGATTAAAG ATTTGGAAGA TGGAAGCGGC AATGTAGCTA TCGAAGGTCA CATCTTTAAT
ACCGATATTC ATGAATTAAA ATCCGGAAGC GTAATTTTTA CAGGTGAAAT AACTGACTAT
ACTGATTCAA TCAGCTTTAA AAAATTTGTT TCTGATAAGG AGCAGATTGA TTATCTAAAA
GAAATCAAGC CTGGCGTTTG GGCTCGTATG CAAGGTTATG CAGCTGACGA CCAATATCAG
CACGATGTTG TTTTTAATAT TCGTAACCTA GAATTAATTG AACATAAGGG TCGAGAAGAA
AAGTATGAGG GAGAAGAAAA ACGAGTTGAA CTGCACCTTC ATACAAATAT GAGTCAATTA
GACGCAACTA GTACTGCTAG TGATTTTATT AAAACCGCTA AAAAATTTGG TCAAAAAGCA
ATTGCAATAA CTGATCATGC TGATGTTCAA GCATTCCCAG AAGCATATCA TACCGGTGCA
AGTGAGAAGA TGAAGATTCT GTATGGATAT GAAGCTAATA TGATTGATGA TCATGCTTTG
CTCGTGCTTA ATCCTACTGA AATGGATTAT CGTGATCGTG AATATGTGAT TTTTGATGTT
GAAACGACAG GTCTTTCATC TGTCTATGAC ACTATTATCG AAATTGGTGC TGTTAAGATG
AAAAATGGTG AGGTGCTTGA AAGATTTGAT GAGTTTATTA ATCCTCATCA TCCTTTAAGT
GATACTACTA TTAATTTGAC ATCAATTACC GATGAAATGG TTGGAGCAGC TGACGATGAA
AAGGATGTAA TCAAGAAATT CAAAGATTTC TATGGAGACC GTCCTTTATG TGGTCACAAT
GTTCAGTTTG ACGTAGGTTT TGTAAACGCT GCTTTACGTC GTGCAGGCTT AGATGAAATT
TCTCAACCTG TTGTTGATAC CCTTGAAGTT TCAAGACTGT TGCATCCTGA GCAGACTCGA
CATACTCTTG ATTCGCTAGC CAAAAAGTAT AATGTTGTTT TGGAACATCA CCACCGAGCT
AATCAAGATG CCGAAGCTAC AGGATATTTG ATGTTTAAGT TACTTGATGC TTTTAATGCT
CGCTTCCATG AAGCAGATTT AGGTAAAATG AATGACTATG CGAAGTATGG TCAAGTATAC
AAGAGAGCTA AGCCTAGCCA TATGAGTGTT CTTGCTTTGA ATCAAGAAGG CTTAAAGAAT
ATGTATAAGC TTGTTTCACT AGCAAGTACG AAATACTTTT ATCGTATACC TAGAACGCCT
AAATCCGAAT TAAGAAAATA TCATAAAGGA CTATTGTTTG GCAGTGGCTG CTGGCAGGGC
GATGTGTTCA TCTCAATGAT GCAAAAAGGA TATGATGAGG CGCGTGAGAA AGCCCGCTTT
TATGATTATC TTGAAGTGCA GCCACCTGCA GCTTATCAAA CGCTAATCGA CGATGATTTG
ATTAAAGATG AAGATGAATT GCATGAGATT ATTCAAAATA TTTATAAATT AGGTAAAGAA
TTGAATAAGC CAGTTGTTGC AACTGGTGAC TCGCATTATG TTGAACCCCA TGAGGCCATC
TATCGTAAAA TTTTATTAGC TGCGCAAAAG TCAAATCCTA ATCGTAATAA GAAATTACCT
GATTTGCATT TTTATTCTAC GCAGGAAATG TTGGATGCTT TCAGCTTTTT AGGAGAAGAT
GTTGCTAAAG AGATTGTAAT TGAGAATACA AATAAATTAG CAGATCAAAT TGAAGAAATT
GCTCCTATTA AGAGTGGTTT ATATCCGCCA CATATTGAGA ATGCAGATCA AGAAATGAAA
GACCTGACTT ACAACAAGGC TTATGAATTA TATGGAAAAC CACTACCTAA GATTGTAGAA
GATAGAATTG AACTCGAATT AAATTCGATT ATTTCTAATG GATATGCTGT TATTTATCTT
ATTTCTCAGC GTCTTGTTGC CAAATCAAAT AAAGATGGTT ATTTGGTAGG TTCTCGTGGA
TCAGTTGGTT CTAGTTTGGT AGCAACAATG TCTGGAATTA CCGAAGTAAA TCCTTTGGCT
CCACACTATC GTTGTCCTAA ATGTAAATAT TCTAAATTTT TTGAAAATGG GGAATATGGT
TCTGGCTACG ACTTACCTGA TAAAAATTGT CCGAAGTGTG GAACTCCTTT AGTAAAAGAT
GGGCAGGACA TCCCCTTTGC CACTTTCTTA GGCTTCCACG GAGATAAGGT TCCGGATATC
GATTTGAACT TCTCTGGAGA CTATCAGCCA GTAGCTCATA ACTATATTCG TGTGATGTTT
GGTCCAGATA ATTCATTTAG GGCTGGTACA ATTGCGACTG TTGCTGATAA GACAGCTTAT
GGATATGTAA AGCATTATGA AGATGAAAAT GAATTGCATT TAAGAAATGC TGAGCTTGAT
CGTTTAGCTG CCGGTGCTTC CGGGGTGAAG AGAACAACTG GTCAGCACCC AGCTGGAATT
GTTGTTGTTC CCGATGATAT GGATATTTAT GACTTTACTC CTGTGCAGTA TCCTGCTGAT
GATTTAAGTG CAGCTTGGCT TACAACGCAC TTTGATTTCC ACTCTATTCA CGATAATATT
TTGAAATTTG ATATTCTAGG GCATGATGAC CCAACTATGA TCAGAATGCT GCAAGATTTA
TCAGGAATTG ACCCATTAAC TATTCCGCCT GATGATCCAG GAGTAATGTC CTTATTTTCA
AGTCCCAAAA TTTTAGGTGT TACTCCTGAG CAAATTCAGT CAAAGACTGG TACTTTGGGT
GTTCCAGAAT TTGGTACAAA ATTTGTTCGA GGAATGCTTG AAGAAACAAA GCCAACCACT
TTTTCAGAAT TGTTGCAGAT TTCAGGTTTG TCTCACGGGA CTGATGTATG GTTAGGAAAT
GCAGAAGATT TAATTAATAA CGGAACTTGC AAGTTAAAGA ACGTAATTGG TTGTCGTGAT
AACATCATGA TGGACTTAAT TCACTGGGGA GTAAAACCAG AAGTTGCTTT CTTTACAATG
GAATCTGTAC GTCATGGTAA GGGAATTAGT GATGAAAACA TGGAAATTCT GAAGAAAAAT
GATAAGATTC CTGACTGGTA CATTCCTTCT TGTTTGAAGA TTAAGTATAT GTTCCCTAAG
GCCCATGCTA CAGCCTATAT CTTAATGGCA CTTAGAATTG CTTGGTTTAA GGTATATTAT
CCAGTAATTT ATTATGCTTC TTATTTCTCA GTTCGGGCTG ATTTGTTTGA TTTAGTTGCA
ATGAGTCATG GAAAGAACAC AGTAAAGGCT GCAATGAAGG AAATCCAAGA TAAAGGAATG
GACGTTTCTG CTAAGGATAA GTCGTTACTT ACTGTTCTTG AAATTGCAAA TGAATGTTTA
GAACGTGGTA TAAAGATTAA GATGGTCGAT GTGAATGAAT CTGAAGCAAT GGACTTTAAG
ATTATTGATG ATCATACTAT TCTAGCTCCA TTTAATGCAG TTCCAGGTTT AGGTGATAAT
GCTGCTAAGC AAATTGTTGC TGCGCGCGCA GAGCAGAAGT TTCTTTCAAA GGAAGATCTT
GCAACACGAG GGAAAGTATC ACAAACAATA ATGGAATACT TTGAGAACAA TGGAGTTCTT
GAAGGGATGC CAGATCAAAA TCAATTATCA CTATTTTAG
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| Protein sequence | MANKNELFKK LLDQIKFPDK FEDNDIVQNG EIENVDVYAN ERKWKIHVFF DTPLDFETYR
SLNELIHQTF EPFVNVELIV RTKDGSSKNL PEYWTYAIQN STNLKPAVRE FLQGQAPYLE
KEKWLIPTQN NVVNGLLSEQ VLAELNSEFR RYGFFNIKFT TKVDETNIDE NLKSLEQVQA
QHESAMQEFY EKQPAEPKKK MPVKSTRMGS NKVDKKAKFI QIKDLEDGSG NVAIEGHIFN
TDIHELKSGS VIFTGEITDY TDSISFKKFV SDKEQIDYLK EIKPGVWARM QGYAADDQYQ
HDVVFNIRNL ELIEHKGREE KYEGEEKRVE LHLHTNMSQL DATSTASDFI KTAKKFGQKA
IAITDHADVQ AFPEAYHTGA SEKMKILYGY EANMIDDHAL LVLNPTEMDY RDREYVIFDV
ETTGLSSVYD TIIEIGAVKM KNGEVLERFD EFINPHHPLS DTTINLTSIT DEMVGAADDE
KDVIKKFKDF YGDRPLCGHN VQFDVGFVNA ALRRAGLDEI SQPVVDTLEV SRLLHPEQTR
HTLDSLAKKY NVVLEHHHRA NQDAEATGYL MFKLLDAFNA RFHEADLGKM NDYAKYGQVY
KRAKPSHMSV LALNQEGLKN MYKLVSLAST KYFYRIPRTP KSELRKYHKG LLFGSGCWQG
DVFISMMQKG YDEAREKARF YDYLEVQPPA AYQTLIDDDL IKDEDELHEI IQNIYKLGKE
LNKPVVATGD SHYVEPHEAI YRKILLAAQK SNPNRNKKLP DLHFYSTQEM LDAFSFLGED
VAKEIVIENT NKLADQIEEI APIKSGLYPP HIENADQEMK DLTYNKAYEL YGKPLPKIVE
DRIELELNSI ISNGYAVIYL ISQRLVAKSN KDGYLVGSRG SVGSSLVATM SGITEVNPLA
PHYRCPKCKY SKFFENGEYG SGYDLPDKNC PKCGTPLVKD GQDIPFATFL GFHGDKVPDI
DLNFSGDYQP VAHNYIRVMF GPDNSFRAGT IATVADKTAY GYVKHYEDEN ELHLRNAELD
RLAAGASGVK RTTGQHPAGI VVVPDDMDIY DFTPVQYPAD DLSAAWLTTH FDFHSIHDNI
LKFDILGHDD PTMIRMLQDL SGIDPLTIPP DDPGVMSLFS SPKILGVTPE QIQSKTGTLG
VPEFGTKFVR GMLEETKPTT FSELLQISGL SHGTDVWLGN AEDLINNGTC KLKNVIGCRD
NIMMDLIHWG VKPEVAFFTM ESVRHGKGIS DENMEILKKN DKIPDWYIPS CLKIKYMFPK
AHATAYILMA LRIAWFKVYY PVIYYASYFS VRADLFDLVA MSHGKNTVKA AMKEIQDKGM
DVSAKDKSLL TVLEIANECL ERGIKIKMVD VNESEAMDFK IIDDHTILAP FNAVPGLGDN
AAKQIVAARA EQKFLSKEDL ATRGKVSQTI MEYFENNGVL EGMPDQNQLS LF
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