| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0777 |
|---|
| Symbol | |
|---|
| ID | 4440026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 754939 |
|---|
| End bp | 755853 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639672634 |
|---|
| Product | ABC-type dipeptide/oligopeptide/nickel transport system, permease component |
|---|
| Protein accession | YP_814606 |
|---|
| Protein GI | 116629434 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000238317 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000000000000588026 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAG ATAAAAATAC ATCGAAAAAA GATCAAAATG CTAAAACCTC TCTACCACCA
TCTGGATTTA AGATTATCGT TCGCGAGGTT TGGCGTGATA AGGTAGCATT TGCTTCATTT
TGTATTATCG TTGCTATCTT ACTATTTACT TTTGTTGGCT CATTGTTCCT AAACAAGAGC
CAAGTAACAG AAATTAATAT TGCTGAGGCA TATTATGGAT GGGGTGAATC AGGTCACATC
TTTGGTACTG ATGACGGTGG TCGTGACATC TTGAAGTTAT TAATGATGGG TGGACGTAAC
TCTATTTTAA TTGGTCTATC TGTTACTGTA CTTTGTGAAG GTGTTGGACT TTTAGTTGGT
TTATTCTCTG GTTACTTTGG TGGAGTTACT GATGCAGTTA TTATGCGTAT TGTAGACTTT
ATCCAAATTT TGCCACAATT CCCAATTATC ATTGTTTTGA CTACTGTTAT TCCTAACTAC
AATGCCGGAA CTTTAGTATT ATTAATTTCT ATGTTTGGAT GGACATCGAC TGCTAGATAC
TTCCGTGCCT TTGTTCTTTC ACAGAGAGAA CGTGAGTATG TTTTAGCTTC AAAGACTTCT
GGTTCGTCTA ATTTAACAAT TATTTTCCGA GAAGTTTTGC CAAACATTAC TTCAGCGTTG
GTTATCGATG TCGTATTGAT GATCGCTGGT AACATTGGTA TTGAAACTAC CCTATCTTTC
TTGGGATATG GACTACCAAC TACTACGCCA TCACTTGGTA CTTTAATTGG ATTTGCTAAC
GACCCAGTTA ACGTTACTAC TCGTCCATGG TTATGGATGC CAGCAACATT TTTATTGCTA
ATTATTTCAT TGAGTATTAA CTACGTTGGT CGTGCTCTTC AAAGAGCTGG AGACGCTCGT
CAACGTGAAA ATTAA
|
|---|
| Protein sequence | MAKDKNTSKK DQNAKTSLPP SGFKIIVREV WRDKVAFASF CIIVAILLFT FVGSLFLNKS
QVTEINIAEA YYGWGESGHI FGTDDGGRDI LKLLMMGGRN SILIGLSVTV LCEGVGLLVG
LFSGYFGGVT DAVIMRIVDF IQILPQFPII IVLTTVIPNY NAGTLVLLIS MFGWTSTARY
FRAFVLSQRE REYVLASKTS GSSNLTIIFR EVLPNITSAL VIDVVLMIAG NIGIETTLSF
LGYGLPTTTP SLGTLIGFAN DPVNVTTRPW LWMPATFLLL IISLSINYVG RALQRAGDAR
QREN
|
|---|
| |