| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0565 |
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| Symbol | |
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| ID | 4440240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 593714 |
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| End bp | 595093 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639672422 |
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| Product | hemolysin-like protein |
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| Protein accession | YP_814400 |
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| Protein GI | 116629228 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000485397 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.00159471 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTCTACAA GTACTATAAC TACTAATTTA ATTGTCATTT TCATAACGTT TTTAATTGCG
ATATTCTTTG TTGTTGCCGA ATTTGCTTTA GTGCAAACTA GATCTAGTCA GCTAGAAGAT
ATGCTAGCAA ACGGTCAAGG CAATCCTAAG AAGTTAAAGC GTGCTTTGCA CATGGTTCAT
AACTTAAATG AATCATTATC TACTACTCAG GTGGGTACGA CCTTAGTCGG TGTTATTTTA
GGTTGGATTG GTCAAGGAAC AATCGAAGAA TTATTGACTG ATGTATTTAA GATGACGCCA
TGGTTTGGGG CAAAGACTAG CGGTGTATTA GGAGCAACTT TAGGTGTTGT ATTGTTAACC
TACTTAGAAG TTGTTGTAAC TGAAATTGTT CCTAAAAATA TTGCTATCGA TATGCCTGTT
AAGTGTTTGA TGGCTGTTGT TACTCCCTTG ACAGTCTTTC ATACGGTAGT ATATCCATTT
GTTTGGTTAC TTAACCATAG CGCTAATGGC TTACTTCATT TATTGGGAAT GCAATCAGCT
GATGAAGAAA GCGAAGTTTA TTCACAATCT GAAATTCTAC GTTTATCACG TAATGCTGTA
ACTGGTGGAT CACTTGATAA AGACGATTTG TTATACATGG AGCGTGCCTT TGAATTAAAT
GATAAGGTTG CTAAAGATAT TATGACTGAT CGTACTCAGC TTCAAGTTTT GAATGCCACT
GATAATGTTA AAACTGCTTT AAAGAAGTAT ATTGAGGATG GTTTTAGTCG TTTTCCAGTT
GTTCGTGATA ATGATAAAGA CGATATTGTC GGTTATGTTT ATGCTTATGA TATTGTAAGC
CAAGATCAAG AAAGTCCTGA TGTCCCGATT ACTAGAATTA TTAGAGCGAT CATTACTGTG
CCTGAATCCA TGTTGATTCA AGATATCTTG AAGTTAATGA TCAAAAAACA TACTCCAATT
GTTCTAGTAG TAGATGAATA TGGTGGCACC AGCGGTATCG TAACGGATAA AGATATTTAT
GAAGAGCTCT TTGGTTCAAT TAAAGATGAA ATTGATGATG TTTCTGATGA ATATATTGTT
CGTGATGATC ATGGGGACAT TCATGTTTCA GGAAAGACTA CTTTATACGA TTTTGAACGT
TACTTCCATA CTAAACTTAA GAGTTTTGAA GACAGCGATA TAATTACTAT CGGTGGCTAT
ATGATGGAAC ATTACCCTAA CTTGAAGAAG GGTGAATCTG TTGACTTAGA AGGCTTTAAG
TTCAAATTGG TAAATATCGA ACAAGGTTTC ATGCGTTGGT TCCTTGTTTC TAAGATAGCC
AGGAACACTG ATAAGAAAGC AGCAGATAGC GATCAAAATA AAGAAGAAAA AGCTAAATAA
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| Protein sequence | MSTSTITTNL IVIFITFLIA IFFVVAEFAL VQTRSSQLED MLANGQGNPK KLKRALHMVH
NLNESLSTTQ VGTTLVGVIL GWIGQGTIEE LLTDVFKMTP WFGAKTSGVL GATLGVVLLT
YLEVVVTEIV PKNIAIDMPV KCLMAVVTPL TVFHTVVYPF VWLLNHSANG LLHLLGMQSA
DEESEVYSQS EILRLSRNAV TGGSLDKDDL LYMERAFELN DKVAKDIMTD RTQLQVLNAT
DNVKTALKKY IEDGFSRFPV VRDNDKDDIV GYVYAYDIVS QDQESPDVPI TRIIRAIITV
PESMLIQDIL KLMIKKHTPI VLVVDEYGGT SGIVTDKDIY EELFGSIKDE IDDVSDEYIV
RDDHGDIHVS GKTTLYDFER YFHTKLKSFE DSDIITIGGY MMEHYPNLKK GESVDLEGFK
FKLVNIEQGF MRWFLVSKIA RNTDKKAADS DQNKEEKAK
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