| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0526 |
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| Symbol | |
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| ID | 4440271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 554683 |
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| End bp | 556461 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639672383 |
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| Product | ABC-type multidrug transport system, ATPase and permease component |
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| Protein accession | YP_814361 |
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| Protein GI | 116629189 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000230499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.803212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATTGA TGAGTAATAC TAAAAAAGCC TTGAGATACT TTGCTAAGTA TCTGAAGAAT
TACTGGAAGG GAGTTACGAT AGTTGTAGTT CTTTCCTTGG TTTCAACTTT AAGTCAGGTT
TTAGGACCGC TTTTCCTGGG AAATGCCGTT CAAGAATTAA CTAAGGCTGT AAGCAATGTA
GCTAGACGTA GTCACGATTT AAGCAGTTTT TATCAGTCTC TTGGCTCAAT GGTCAGTGTA
TATGCAGCAG GAATTATTGC TTCTTTCATT GCTTGGATGG TAATGTCTAA ATTTACTGCG
AATGCTACAA ATGATATGAG AGAGAACTTA TTTGCTAAGT TTCAGAGAAT GTTAATTCGA
TATTTTGATA CTCATCAAGA TGGAAAGCTG TTATCTTTAT TTAATTCAGA TTTAGATAAT
ATTTTTAATG CCTTAAACAA TGCAATTTTC GAAATTATTT CTCAAGGTGC ATTATTAATC
GGAACGATTA TTATGATGTT CATTGTCAAT CCGACAATGG CTTGGTTTAC AGTGGCAACA
ACCCCATTTA TTTTGATAAT TAGTTTAGTT ATTATGAAAA AGGCACGGAT TTACCTAGAT
AAACAGCAAG ATAAAATCAG TGACCTTAAC GGCTATGTTA ATGAACAGAT TAATGGTGAA
AAAGTTATTA TTACTAACGG TTTACAAGAA GAATCAGTTC AAAGTTTTAA AAAATACAAT
AACGATGTCC GTAACGCTAT GTTTAAGGGG CAGTTTTATT CCGGAATGCT TTTCCCCTTA
TTACAGGGAA TTTCTTTACT AAACTTAGCT ATTGTAATTG GTGGAGGCGC ATGGTTAATT
GTTAGTGGCC AGGTAAGTAG GGCAGTTGGC TTAGGATTGA TTGTGGCCTT TGTTGAATAT
TCTCAAACAT ATTTCCAACC TCTAACTCAA TTAACTTCTA TTTATTCTAT GACTCAGCTC
GCCTTAACTG GTGCAAGAAG ATTAGCTACT GTTGAAGAGC AAGATGAAGA AAATACTGTG
CCAAATGGTA AAGTTTTACA GGGAATTAAA AAAGGCGTTA AGCTCGAAAA TGTTCATTTT
GGCTATAACG CTGATAAAGA AATTTTGCAT GGTGTTTCAA TTGACGTTGA TAAAGGAAAA
TCTGTTGCTG TAGTTGGTCC AACTGGATCG GGGAAAACGA CTATTATGAA CTTGATTAAT
CGCTTTTACG ATGTTAATAG TGGAAAAGTA ACCTTTGATG GCGTTGATGT GCGTGATATT
ACGCTTGAAT CTTTAAGAAA TAATGTAGGT ATTGTTCTAC AAGATTCAGT GCTGTTTACT
GGAACAGTTG AAGATAATAT TAAGTATGGT AAGCCAACTG CTAGTCGAGA AGAAGTAATT
GCAGCAGCAA AAGAAGCTAA TATTCACGAC TTTATCATGA CCCTGCCTGA AGGCTATGAT
ACCCATGTTT CAGAAGAAAA TTCGGTCTTT TCTACAGGTC AGAAACAATT AATTTCGATT
GCTAGAACTA TTTTGACTGA TCCAGAATTT TTGATTTTGG ATGAAGCGAC TTCTAATGTT
GATACAGTTA CTGAAGCCAA GATTCAAAAG GCAATGGATG CCGTTATTGC GGGTAGAACA
AGCTTTGTTA TTGCTCACCG TTTGAAGACA ATTCTAAATT CAGATAAAAT AGTAGTATTG
AAAGACGGAA ACGTCATTGA AGAAGGAAAC CACGACGAGC TACTTAAGAA ACGTGGATTT
TACTACGGAC TATATACTAA TCAAATGGCA TTTGAATAA
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| Protein sequence | MKLMSNTKKA LRYFAKYLKN YWKGVTIVVV LSLVSTLSQV LGPLFLGNAV QELTKAVSNV
ARRSHDLSSF YQSLGSMVSV YAAGIIASFI AWMVMSKFTA NATNDMRENL FAKFQRMLIR
YFDTHQDGKL LSLFNSDLDN IFNALNNAIF EIISQGALLI GTIIMMFIVN PTMAWFTVAT
TPFILIISLV IMKKARIYLD KQQDKISDLN GYVNEQINGE KVIITNGLQE ESVQSFKKYN
NDVRNAMFKG QFYSGMLFPL LQGISLLNLA IVIGGGAWLI VSGQVSRAVG LGLIVAFVEY
SQTYFQPLTQ LTSIYSMTQL ALTGARRLAT VEEQDEENTV PNGKVLQGIK KGVKLENVHF
GYNADKEILH GVSIDVDKGK SVAVVGPTGS GKTTIMNLIN RFYDVNSGKV TFDGVDVRDI
TLESLRNNVG IVLQDSVLFT GTVEDNIKYG KPTASREEVI AAAKEANIHD FIMTLPEGYD
THVSEENSVF STGQKQLISI ARTILTDPEF LILDEATSNV DTVTEAKIQK AMDAVIAGRT
SFVIAHRLKT ILNSDKIVVL KDGNVIEEGN HDELLKKRGF YYGLYTNQMA FE
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