| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0460 |
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| Symbol | |
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| ID | 4440356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 489249 |
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| End bp | 490907 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639672318 |
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| Product | polysaccharide transporter |
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| Protein accession | YP_814296 |
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| Protein GI | 116629124 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000146874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.345583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATA ATACTAAAAA TACTAAAGAG ACAATGGTCA AAGGTTCCGC ATGGATGACC
TTTGGCTCTA TTGTGTCACG AATTTTAGGT GCATTGTATA TTATTCCTTG GTATGCCTGG
ATGGGAAGCC ATGGAAATAT TGCTAATGCC CTAACAGCGA AAAGTTATAA TATTTATAGC
TTATTTATCA TTATTTCTAC GGCTGGTATT CCTGGTGCAG TTGCTAAGCA AGTAGCGAAA
TATAATGCTC TAAATGAATA TGACATTGGA CGTAAGCTGT TTAGACGTGG CTTAATTTTG
ATGGCAATTT TTGGCGTAAT TTGTGCTGCT ATCATGTACT TTGGTGCTCC GATTTTAGCC
ACTGACAATA TTATTGGTGC ACTCTTACAT GGGGCAGAAA GTGATCCACG ACAAGTTGCT
GTAATGAGAA GTTTATCTTA TGCAGTTTTA ATTATTCCAA TTTTGAGTAT TATGCGTGGA
TATTTCCAAG GTTATGCAGA CATGATGCCA CCAGCTATGT CTCAATTTGT TGAACAATTA
GCTCGTGTAT TGTGGATGCT TTTAACAGCA TATATCATCA TGCAAGTTCA ACATGGTTCC
TATGTTCATG CTGTTGTTCA ATCAAATCTA GCTGCAGCTA TTGGTGCAGT ATTTGGAATT
TTGCTTTTAG TTTGGTTCTT ATACCGTAGA AGAAATGAAT TAAATGCATT GATGGAGCAT
TCAAATCATG CAATTAAGAT TTCAACTGCT GGAATTTTTT GGGAAATTAT TAATCAATCA
ATTCCATTTA TTATCATTGA TTCAGGAATT ACACTATTTC AATTGATTGA CCAATATACG
TTTCACCCAA TGATTGCGAT GTTTGTTCAT GCAAGTTCTG ATCAAATTGA ATCATGGTAT
GCCTTATTTG GATTAAATGC CAATAAATTA ATCATGATTA TCGTGTCTTT AGCTACTGCG
ATGTCAGTAA CAGCCATTCC TCTTTTATCG GGTGCTCATG CAAGACGCGA CTATGCAAGC
ATTTCTAGTC AAATTGAGAA CACATTGGAA TTATTCCTAT TTGTGATGAT TCCCGCCTCT
TTAGGGATGG CTGCAATTGC AACACCAATT TATACGATTT TTTATGGCTA TGATCCATTA
GGTTCAAATG TCTTATATTT GTCATCTTTT ACAGCAATCA GTCTTGGACT TTTTACGGTT
TTAATGGCAA TTTTGCAAGG TTTATCAGAA AATGGACTAG CAATAAAATA CTTAGTTTTG
GGAATCATTA TTAAATTTGC GGTTCAGTTA CCAATGATTC AATTATTTAA GGTATATGGG
CCACTTTTAG CTACAAATAT TGGATTAATT ATCACTATTT GGCTGTCCTT GAAACATTTA
AAGGTTAGAT ACAAATATAA TAGTGGTCGC ACATCGAGAA GATTCATTGG AATTGCAATT
TTCTCAATGG CTATGTTTGT CGTAGTTACT GGAGTGGTTG ATTTTGGTGG AAAAATCATT
TCGCCTGAAC GGCGTCCAAC TTCCTTTATT TTAGTAATAC TTGCTGTTGC CATTGGTGGC
ATTTTGTATG CATTCCTATC ATTGAAATTT GGTTTAGCAC AAAAGATCAT TGGACCAAAG
GTTAACCGGG TATTAGCAAG ATTGCATATT AGAATTTAA
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| Protein sequence | MENNTKNTKE TMVKGSAWMT FGSIVSRILG ALYIIPWYAW MGSHGNIANA LTAKSYNIYS
LFIIISTAGI PGAVAKQVAK YNALNEYDIG RKLFRRGLIL MAIFGVICAA IMYFGAPILA
TDNIIGALLH GAESDPRQVA VMRSLSYAVL IIPILSIMRG YFQGYADMMP PAMSQFVEQL
ARVLWMLLTA YIIMQVQHGS YVHAVVQSNL AAAIGAVFGI LLLVWFLYRR RNELNALMEH
SNHAIKISTA GIFWEIINQS IPFIIIDSGI TLFQLIDQYT FHPMIAMFVH ASSDQIESWY
ALFGLNANKL IMIIVSLATA MSVTAIPLLS GAHARRDYAS ISSQIENTLE LFLFVMIPAS
LGMAAIATPI YTIFYGYDPL GSNVLYLSSF TAISLGLFTV LMAILQGLSE NGLAIKYLVL
GIIIKFAVQL PMIQLFKVYG PLLATNIGLI ITIWLSLKHL KVRYKYNSGR TSRRFIGIAI
FSMAMFVVVT GVVDFGGKII SPERRPTSFI LVILAVAIGG ILYAFLSLKF GLAQKIIGPK
VNRVLARLHI RI
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