Gene LGAS_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0269 
Symbol 
ID4438777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp302066 
End bp303037 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content40% 
IMG OID639672128 
ProductL-lactate dehydrogenase 
Protein accessionYP_814115 
Protein GI116628943 
COG category[C] Energy production and conversion 
COG ID[COG0039] Malate/lactate dehydrogenases 
TIGRFAM ID[TIGR01771] L-lactate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAG AAAAAATTCA TAAGATTATT CTTGTTGGTG ACGGTGCTGT AGGTTCTACT 
TACGCATTTT CATTAGTTCA ACAAGGTATC GCTCAAGAAT TAGGTATCGT TGATATCGTT
AAAGAAAGAA CTCAAGGTGA TGCTATTGAC TTAGCAGACG CAACTCCTTG GATTGCACCA
AAGACTATTT ACTCTGCAGA ATATTCAGAC GCAAAAGACG CTGACTTAGT AGTTATTTCT
GCTGGTGCTC CACAAAAGCC AGGTGAAACT CGTCTTGACC TTGTTAACAA AAACTTAAAG
ATTTTATCTT CAATTGTTGA ACCAATCGTT GAATCTGGAT TCAATGGTAT TTTCTTAGTT
GCTGCTAACC CAGTTGACAT TTTAACTCAC GCAACTTGGA GAATGTCAGG TTTCCCTAAG
GATCGTGTTA TCGGTTCAGG TACTTCACTT GATACTGGTC GTCTTCAAAA AGTTATCGGT
GAAATGGAAC ATGTTGATCC TCGTTCAGTT AATGCATACA TGCTTGGTGA ACACGGTGAT
ACTGAATTTC CAGTATGGAG CTACAACAAT GTTGGTGGCG TAAAAGTTAG CGACTGGGTA
AAAGCTCACC CAGAAGTTGG CGAAAACAAG CTTGAAGCAA TCCATAAAGA AGTTGCTGAC
ATGGCTTACG ATATCATTAA CAAGAAAGGT GCTACTTTCT ACGGTATCGG TACTGCATTA
GCATTCATTA CTAAAGCTAT CTTGAACAAT GAACACAGAG TTCTTCCACT TTCAGTACCT
ATGGATGGCG AATACGGCTT ACACGATCTT CACATTGGTA CTCCAGCAGT TGTTGGTCGT
CACGGTTTGG AACAAGTTAT TGAAATGCCA TTAAGCGCTG ACGAACAAGC TAAGATGGAA
GCTTCTGCAA AGCAATTGAA AGAAGTTATG GACAAAGCCT TCAAAGAAAC TGGCGTAAAA
GTTCGTCAAT AA
 
Protein sequence
MSEEKIHKII LVGDGAVGST YAFSLVQQGI AQELGIVDIV KERTQGDAID LADATPWIAP 
KTIYSAEYSD AKDADLVVIS AGAPQKPGET RLDLVNKNLK ILSSIVEPIV ESGFNGIFLV
AANPVDILTH ATWRMSGFPK DRVIGSGTSL DTGRLQKVIG EMEHVDPRSV NAYMLGEHGD
TEFPVWSYNN VGGVKVSDWV KAHPEVGENK LEAIHKEVAD MAYDIINKKG ATFYGIGTAL
AFITKAILNN EHRVLPLSVP MDGEYGLHDL HIGTPAVVGR HGLEQVIEMP LSADEQAKME
ASAKQLKEVM DKAFKETGVK VRQ