Gene LGAS_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0225 
Symbol 
ID4438751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp260293 
End bp260853 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content40% 
IMG OID639672085 
ProductDNA-directed RNA polymerase subunit delta 
Protein accessionYP_814072 
Protein GI116628900 
COG category[K] Transcription 
COG ID[COG3343] DNA-directed RNA polymerase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00000284137 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00000000000000509139 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAAGGAC GTGCCACTGT GGGGTTAGAT GATTTTAAAG GCCAAAATAA AGACGAATTG 
TCAATGATCG AAGTTGCTCG TGCAATTTTA CAAGATAGCG GCAAGCGAAT GGCCTTTGCT
GATATCGTTA ACGCCGTCCA GAACTTTCTG GGTAAGAGTG ACGAAGAAAT TCGTGAGCGT
TTGCCACAAT TTTACACTGA TATGAACACT GATGGTGAAT TCATTTCAAT GGGTGATAAT
GTTTGGGCAT TGCGTTCTTG GTTCCCATAT GAATCTGTTG ATGAAGAAGT AAACCATCCA
GAAGATGAAG ATGATGTGCC ACGTAAGAAG CACCACAAGA AGGTTAACGC CTTTATTGGT
GATTCTGACG ATGACGACAT TATTGACTAC GATTCAGATG ATCCAGAAGA TGAAGATTTG
GACGTTGATG ACGACGACAA TAATGAAGAT GATTACTCAG ATGATGATCT TGACGATGCT
GACGACAATG AATTAGATGA TGGTATCGAA GGACAATTAT CAGAACTTCA CCAAGATGAT
CTTGATGATG ATGACGATTA A
 
Protein sequence
MKGRATVGLD DFKGQNKDEL SMIEVARAIL QDSGKRMAFA DIVNAVQNFL GKSDEEIRER 
LPQFYTDMNT DGEFISMGDN VWALRSWFPY ESVDEEVNHP EDEDDVPRKK HHKKVNAFIG
DSDDDDIIDY DSDDPEDEDL DVDDDDNNED DYSDDDLDDA DDNELDDGIE GQLSELHQDD
LDDDDD