Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0225 |
Symbol | |
ID | 4438751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 260293 |
End bp | 260853 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639672085 |
Product | DNA-directed RNA polymerase subunit delta |
Protein accession | YP_814072 |
Protein GI | 116628900 |
COG category | [K] Transcription |
COG ID | [COG3343] DNA-directed RNA polymerase, delta subunit |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00000284137 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00000000000000509139 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAAGGAC GTGCCACTGT GGGGTTAGAT GATTTTAAAG GCCAAAATAA AGACGAATTG TCAATGATCG AAGTTGCTCG TGCAATTTTA CAAGATAGCG GCAAGCGAAT GGCCTTTGCT GATATCGTTA ACGCCGTCCA GAACTTTCTG GGTAAGAGTG ACGAAGAAAT TCGTGAGCGT TTGCCACAAT TTTACACTGA TATGAACACT GATGGTGAAT TCATTTCAAT GGGTGATAAT GTTTGGGCAT TGCGTTCTTG GTTCCCATAT GAATCTGTTG ATGAAGAAGT AAACCATCCA GAAGATGAAG ATGATGTGCC ACGTAAGAAG CACCACAAGA AGGTTAACGC CTTTATTGGT GATTCTGACG ATGACGACAT TATTGACTAC GATTCAGATG ATCCAGAAGA TGAAGATTTG GACGTTGATG ACGACGACAA TAATGAAGAT GATTACTCAG ATGATGATCT TGACGATGCT GACGACAATG AATTAGATGA TGGTATCGAA GGACAATTAT CAGAACTTCA CCAAGATGAT CTTGATGATG ATGACGATTA A
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Protein sequence | MKGRATVGLD DFKGQNKDEL SMIEVARAIL QDSGKRMAFA DIVNAVQNFL GKSDEEIRER LPQFYTDMNT DGEFISMGDN VWALRSWFPY ESVDEEVNHP EDEDDVPRKK HHKKVNAFIG DSDDDDIIDY DSDDPEDEDL DVDDDDNNED DYSDDDLDDA DDNELDDGIE GQLSELHQDD LDDDDD
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