| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0195 |
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| Symbol | |
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| ID | 4440333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 227209 |
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| End bp | 228639 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639672056 |
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| Product | cellobiose-specific PTS system IIC component |
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| Protein accession | YP_814044 |
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| Protein GI | 116628872 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00359] phosphotransferase system, cellobiose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0622401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.284293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAC AGAAAAAATC GGGCTTTAGT GTTTTCGTTA ATAAACACAT CTTGCCCCCA
GTAATGAAAT TTGTTAACAC CAAGGCCATC CAAGCCTTGC AAAATGGTAT GATTTACACT
TTACCATTTA TCTTAATCGG TTCTATCTTC CTTATTCTAG GAAATATTCC AATCAAATCA
GTAGCTGATG CAATCAATGC TTCTGGTTGG GGAGCATTCT TTAACCAAGC CTACACTACT
ACTTTTAGTA TCATGGCTAT GTGGGCATCT GTTGGTATCG CCTATATTTA TGTTAAAAAT
GAAGGCTATG AGCCATTAGC TCCCGGTCTT ACTTCTTTAG CATCATTCTT AATGCTTCAA
ACTTTAACTA TTGACAGTCC ATTAAAGAAT GCCATGGCTA AAGGTATCGA CGGTCAAATG
ACTGCTAAAG CTGTAACCGA AAATATTGAC AAGTTACCAC ATGCTTTACA AAGTTTCTTA
GAATCCCCAG TTACAGGCGT ATTTAATATT ACCTGGCTTG GCGGAGACGG TATGATCGCC
GCAATTATTG TTGGTTTATT AGTCGGCTGG ATTTATTCAG CTATTATGAA AAAAGGCTGG
ACTATTAAGT TGCCTGAACA AGTTCCAGCA GCTGTTTCTA ACCAATTTAC TGCTATGATT
CCATCAGGAA TGATCTTAAT TGGTACTATG CTTATTTACG CAGGCTTCAA GCTAACCACT
GGTTCAGACT TCTTACAATG GACCTACCAA ACCCTTCAAA TTCCACTTCA AGGTATCTCT
GATTCACTTG GTGGTGCAAT TGCCATTGGA TTCTTAGTCC CATTCTTCTG GTTCTTCGGT
GTCCATGGTG GTTTAATTGT TGGATCCTTA GCTGGTCCTA TGCTTCAAGC AAACTCATTT
GATAATGCAC AATTATACAA GGCCGGCAAG TTAACTATTG CTAATGGTGC TCACGTTGTT
ACTAATGAAT TCTACAATAA CTTCATTAAC TTAACTGGTT CAGGGATTAC TATTGGTTTA
ATTATCTTTA TCTTAATTGC TGCTAAATCA GCACAATTAC GTTCAATTGG TAAAGTTGAA
TTAGTTCCTG GTATCTTTAA CATTAACGAA CCATTCCTAT TTGGTTTACC AATTGTTATG
AATCCATTCC TTGCAATACC ATTCTTCTTA ACTCCAGTTG TAGTTGCTAT TTCAACTTAC
TTCGTAATTA AAACTGGTAT TGTTCCTCCT CTAAATGGTT TTGCCTGTCC ATGGACGATG
CCAGCAGTTA TTTCTGGCTT CCTAATTGGC GGCTGGAAGA TGGCAATTTG GCAAGCATGT
ACCTTAGTAA TTTCAACCTT AATTTACTGG CCATTTGCTA AGAAATACGA CAACATTCTT
GTTAAACGTG AAGCTGCTAC TCTCAAGAAA GACGAGGCTG AAAGTAAATA A
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| Protein sequence | MSEQKKSGFS VFVNKHILPP VMKFVNTKAI QALQNGMIYT LPFILIGSIF LILGNIPIKS
VADAINASGW GAFFNQAYTT TFSIMAMWAS VGIAYIYVKN EGYEPLAPGL TSLASFLMLQ
TLTIDSPLKN AMAKGIDGQM TAKAVTENID KLPHALQSFL ESPVTGVFNI TWLGGDGMIA
AIIVGLLVGW IYSAIMKKGW TIKLPEQVPA AVSNQFTAMI PSGMILIGTM LIYAGFKLTT
GSDFLQWTYQ TLQIPLQGIS DSLGGAIAIG FLVPFFWFFG VHGGLIVGSL AGPMLQANSF
DNAQLYKAGK LTIANGAHVV TNEFYNNFIN LTGSGITIGL IIFILIAAKS AQLRSIGKVE
LVPGIFNINE PFLFGLPIVM NPFLAIPFFL TPVVVAISTY FVIKTGIVPP LNGFACPWTM
PAVISGFLIG GWKMAIWQAC TLVISTLIYW PFAKKYDNIL VKREAATLKK DEAESK
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