Gene LGAS_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0190 
Symbol 
ID4438836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp223783 
End bp225276 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content40% 
IMG OID639672051 
ProductBeta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase 
Protein accessionYP_814039 
Protein GI116628867 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.136833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA CCTACTCAAT GCCAAAGAAT TTTTATTGGG GTGGCGCTAG TGCTGCTAAC 
CAATATGAAG GTGGCTATAA CGAAGGCGGC AAGGGACTAA ACGCTATTGA TGTTTTGACT
AATGGTTCTG CTACTGAGCC AAGAAAAGTA ACTTGGAAAA CAAACGATGG TAAAACAGGC
GTCACTCCAA TGACTTGGGG TAAAGAATTC AAATTACCTG ATGGTGCAAA ACCAGCACTT
TTAGATAACT ATTACTATCC TAGCCATGAA GGAACTGATT TTTACCATCA TTATCAAGAA
GATATTAAAT ATATGGCTGA GATGGGCTTT AATATGTTCC GTTTATCTCT AAATTGGTCG
CGTATTTTGC CAAATGGAGA CGACCAAGAG CCAAATAAAG AAGGTTTAGC TTTCTATGAC
AAGGTCTTTG ATGAATGTGC TAAGTACGGA ATTGAGCCAC TTGTTACCCT TTCGCACTAT
GAAACTCCCC TATCTTTGAT TAATCGCTTT GGTGGCTGGA AAGATAGAAA AATGATCGAT
ATCTTCGTTC ACTACGCAGA CATCGTTATG AACCACTACA AGGGTAAAGT TAAATACTGG
CTGACTTTTA ATGAAATTAA TGCCATGGAC ATGGCTCCTT ATATGGGTGG AGGCTTAATT
GATGGGAGCA AGCAAAATCG TGCTCAAGGA GCTCACAATC AATTTGTAGC CAGCAGCAAA
GTTGTTAAAT TAGCGCATGA AATTGATAAA AATAATCAAG TTGGTCAAAT GCTCGCCTAC
TCTGCTTACT ATCCATATAC ATCAGACCCC GCAGATCAGC TTTTAGTCAT GAAAGCTAAG
CAAGAAATGC TTTTCTATTC TGACGTTCAA ACAGGTGGCC GCTATCCTGA ATACCGTCTT
AAAGAATATG AACGAGATGG CATTAAATTA GATGATCGCC CAGAAGATTA CGAACTAATC
GAGAAATATC CGGTTGACTT CTTAAGTTTC TCTTGCTACA CATCTAATGT CTTAACAACG
CATGAAGCGG ACGCTAAAGC AAACGGCAAT ATGTCAGCAG GTGGCGTTAA GAACCCGTAC
CTTGACTATA ATGCTTGGGG CTGGGCAACA GACCCTGACG TTTTAAGAAT TGCTTTAAAT
GATCTCTGGG ATAGATACCA CAAGCCACTA TTTATTGTTG AAAATGGTCT TGGTTGGGGC
GATGAATTAA CTAAAGATCA TAAGGTTCAT GATGACTACC GCATTAACTA CCTACGTGCT
CAAATTAAAT CAATGGAAGA AGCAGTTAAC GAAGACGGAA TTCCACTAAT GGGCTACACT
ATGTGGTCAG CAATTGATTT AGTATCAAAC GGAACCGGTG AAATGAAGAA ACGCTACGGT
TTTGTTTATG TAGACCGCGA CGATAAAGGC AACGGTTCCT TGAAGAGATA TCCTAAGGAT
TCATTTAACT GGTATAAAAA GGTTATTGCA TCCCATGGTA AAGATTTAGA CTAA
 
Protein sequence
MTKTYSMPKN FYWGGASAAN QYEGGYNEGG KGLNAIDVLT NGSATEPRKV TWKTNDGKTG 
VTPMTWGKEF KLPDGAKPAL LDNYYYPSHE GTDFYHHYQE DIKYMAEMGF NMFRLSLNWS
RILPNGDDQE PNKEGLAFYD KVFDECAKYG IEPLVTLSHY ETPLSLINRF GGWKDRKMID
IFVHYADIVM NHYKGKVKYW LTFNEINAMD MAPYMGGGLI DGSKQNRAQG AHNQFVASSK
VVKLAHEIDK NNQVGQMLAY SAYYPYTSDP ADQLLVMKAK QEMLFYSDVQ TGGRYPEYRL
KEYERDGIKL DDRPEDYELI EKYPVDFLSF SCYTSNVLTT HEADAKANGN MSAGGVKNPY
LDYNAWGWAT DPDVLRIALN DLWDRYHKPL FIVENGLGWG DELTKDHKVH DDYRINYLRA
QIKSMEEAVN EDGIPLMGYT MWSAIDLVSN GTGEMKKRYG FVYVDRDDKG NGSLKRYPKD
SFNWYKKVIA SHGKDLD