| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0142 |
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| Symbol | |
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| ID | 4440531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 156928 |
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| End bp | 163599 |
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| Gene Length | 6672 bp |
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| Protein Length | 2223 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639672003 |
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| Product | adhesion exoprotein |
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| Protein accession | YP_813992 |
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| Protein GI | 116628820 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01168] Gram-positive signal peptide, YSIRK family
[TIGR02331] Rib/alpha/Esp surface antigen repeat |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGGGAC AGGCTAAAAT GTTATTCAAT AAAAAAGACT TTGATTCTAA ACAACGTTTT
AGTATTAGAA AATTGAGCGT TGGTGTTTGT TCTGTTTTAC TTTCAACTTT ATTTCTAACT
TTTAATGAAG GTCAGACAGT TCACGCAAGT ACGGATGCTA ATGCGGCGGA CACTACAACG
ACTAGTGTAT CATCTAATAC TACTAATAAT AGTTCTGATA ATAATACTGA TAAAAAAGAT
GACTCCAAAG TAGAGACATC TTCTTTGGCA ACCGCTGAAA AGCATGCCCC AATTCCAATT
GCTGCTGAAG TTAAGAGTAA CAAGTCGGAA GATCAGACAA ATAGTGCAAC TACTGAAACT
GCTACTCAAG TAAGTAAATC TAAGCAAGCA CAAAGTCAAA CAACTACTAA TATTGTTAAA
GCTACTGCTA CTCAAGCATC TACTTCTTCA AAAGATAGCT CTGACACAAC AAGGTTTAAG
GATAATTCTG CCCAAAATAC TGTTGAAAAA AATAGATCAA CCTCAACTTC AAAATATACA
CCTGTCTTAA CTAGCGAAAC TTCCGTTTCT ACTAAAACTA ATCAAAGTAA TAGTAATTCT
GCTACTCAAG AAAAATCGAA TATTAAACCT GTTACCCCAC ACGCTGATTC AACTGAACAT
ATTGCACCAA AGACTTACAG CATGGATAGC GACTCACCTG CTTATGTAGT TGCTGGAAGT
GATTTAACGA ATTTGGCCTC AAAATTTATT TCCAATGCGG ATGTCTTGAC TCAAAATGGT
GCTACTTTTT CTTGGGTTGG CAATGTCCCG ACTCCAACTC AACAAGATGC CATTGGTGGT
AATACAATAA CTGGAACTAT TAAAGTAACG TATAAAGATG GCACAAGTAT AACTATTGAT
ATTGAATCTT ACGTTGAAGC ACGATCAGAG CTTCAACCAA GTACCTTCTA CTACGTGAAT
AGGGTTGGCG ATACCCCAGA CTTTAACACC GCCGATGCTA ATGGCAATAA CTTTTCTACA
ATTCTTAAAA ATACAGACGT ATATGATCCG ACTGCTTTTT CTTATAAGAT ATTAGGGACA
CTGGATACAA GTAGTTTAGG TATCCACTGG GCCAATGTTC AAGTTACGGA TAACAATACT
TTTGCTGGTG CACCAGATGC TCCTAAAGTT ATCGGTGGCC TTTATATTGT TAAGGTTCCT
TACGTAGTTC AGGGACTTAA ATTGAAGGAT AATATTCCAA CTGATGCTAA CGGTAATCCT
ATAATTAATG CTCAGTTGGC AACAATGCCG AAGTCAACAT CTACGACACC GACAACACCG
GAGGCTGCTT TTGATCCTGT CCATGGAAAT TCTACTAATT TTCCAGCGGG CTTATGGGGA
CAATATTTCT ACCAAGATTA TGCTTTGGCT TATGCGCTAG GTATCAAAGT GCAAGTAGCT
GCAGATGACC TAGATAATAA TGGAAAGTGG AAAAACAAAC CAACGGATTT AGTCAATACT
AAGACCAACC ACTTCGCAAT GACTTTTAAC AAGTTGCCTA ATGCTACCCA GCAGGAAGTA
GACGTAAATT ACGTATCTGC TCCACATGCT GAAGATATGT ATATCTATAA TGCCGCAAAC
AAAACTTATA TGACTGGTCG ACCAGAAAAT GCGCAAGCAA TTAAGGAATT GCTTGCTGAC
GGCTACATGA ATGATAAAGT TTGGGTAACG TTAGCTGATG GCACTAAGGT CTATGCTTCT
AAACTTGACT ATCTTAATAA TGGTAATAAC TTTGTTGTTG GTGGTGCAAA AGCCGGCCGA
TACAACATTA ACTTCAATGC TAGTTTTGAC CAAAAAAATA GCGCTGGTCA ACCACAGATT
TTTTCAAATA ACATTTTTAA TACAGCAAGT GCTGACTTTA ATGATGACCT AAATAAGTGG
TATCGGAAGA CTAACAATCA GACGGTTGCT AATTATGCTG CACCTACTGC CGCAACCTGG
GATAAGGTTT CAACTAATGG GATTTCCTTA GCACCAACGA TCAAAGCCAG TGATGATCCC
TACGAACAAG ATTTAACCGA CGGCCCAGTT ACTTTTGATA GTGAGGCACT TAAAAATGTG
GTTAAAAATC CAAGTACGGG TGCAGAGGTG CGTAAAGTTC AACATACTTG GCTAGCTAAT
ATGGTCCCTA ACTCAATTCT GGACAATAAC ACGAAATGGC CAGAAGGTAC TAAACTCACT
TGGGCTGGTA ATGATGGCAG TACCAAATTA ACCTTCGATA AAGCCGGTGA AAGCAAGACC
GGGAACGTAA CAATTACTCT TCCAAGTGGT TCTTCATACA CGGTTAAAGA CATTACAGTT
ATCTCTAAAG CTAATGTGAT CGCAAAGAGC GAAACTGTTG ACTACGGTAA GAAACTAACA
GCAGCAGATT TGGTAACTAA CCAGAATGTT TTCCCAGCAG GCACGACTTA TCAATTCGTA
GATGGTTCAG AACCAACTTG GGGGACAGCT GGCTCATACG ATCATGTTAA AATTACAGCT
ACTTACAAGG ATGCTAGTGG GGCAAGTGTT AATACACCAG TTGCAAACTG TGCAGTTGCT
ATTAACGATA GCCGGAGCAT TAAGGTATTA GCTGGTAGTG ATGTTCCTTC AGTTGATAGT
GTTTTGAACT TGCCTAACAA TTGGGAAGAG CACACTGCAT TCTGGACTAC GCCAATTAAC
ACTACTGCAA CTAATGAAGG TTTAATTACG ATTCATTACC CATCAAGCAA TTTGGATCAG
AAAATTAAAG TTTATGTAAC TGTTATTCCG AAGACCAGTG CAGTTGATGG ACAAAACTTC
TTTACTAATG GTAATAAGTA CGATGGTACA GAGGGTAGCA TTGCTAACGG TGCTAACCAA
GGTGCAATTT TAACCCAAGC TAATGGTCAA GCAATTGACT ACACTACTTA TAGTGGTTCT
AATACACCGG GAACGCAAAC ATCTTATGAT ACGAAGACGA CCAGTTACAC ACCAACTTAC
GGTCTGTCTG GACTTCAGAC CAATAGCGAT GGCAGTTTAG TTAGCGGCGT TCAAACCGCA
ACTGTTCGCG TGTCTGTACC TAAGGGTACG ATTGGTGCCA AAGTAGATGC TGATGACAAT
TACTACTATG AACTAAACGC TAAAGTAAAT ATTGCTCAAC CTGTTACTTT TGAGTTTGTA
GATGAATATA ACAATGATCA AGTAGTTGGT CAGACCTACT CACAAGAATT TGTGCCCGGA
ATTGATACAA ATCTCAATTT CAGTATGGCT ATGCCAGATG GTTATGAACT AGGAAATGGT
GCTTCAATTC CAAGTCAGTA TACTTTGCCT GCCTTTAGTC AAACGACACC GGTTGTCAAA
GTACCTATTC ACCAGAAGAT GCACTTCTAT ATTACTTTCC ACGATGAAGA TTCAAATACT
AATCTTGGTA CGGTAGAAGT GTCAGGCAGT GCTGCAGCAG GAACTGGTGG CTATTATCCA
AGCATTAACA CGAAATTAAC ATTCCCAGCA GGTGCTGATG CTGGTGACTA TTATTCTGTT
TCAACTTCTG GCGTGCCGGA TGGGGTGCAG TTAGTTGGGA GTTACGGGGT ATCGCTTACC
AATCCAACCG CCGATTGGAC AACTCCAAAC TATCAGTGGG AGAATACTTT CTCCGTTCTT
AAGGCTTTAA CCGGTGCAAC GATGACCATT AATCTTAAGC ACAAGTTTAA TGAAACGCAA
GAAAAACAGA CGCGTACTGC AACGGTTAAC TATGTTAAGG CTAAAGTTAA TGCGGATGGT
ACTTATACCC AAGATGGCAA TGCATTTACT TCTGCTGTCC TTGATGTGTA CTACTCAAGA
ACTAAGTCAG AGGATCTGGT TACTAAGAAA ATCACTTATA CTCCATGGCT GTGGGATACA
AATCAAGGTG ATAGAACAAC TCCTGGTTAT CATGTTGAAT CTGGTAAGTG GACTAGTCTT
CCACAGCATT GGGCAGCTGT TGTTGCAGAT GTGCCGACAT TAGCTGGTTA CACTGCTGCT
ACAGTTACCG ATAAGTCCGG CAAGCCAGCA AATCAATTTG TTTTTCCAAC TTGGAATGGA
TCAGATCAAG ATACATCTAA TATTAATAAG GAATCCTTAG CATATACTGA GAACGCCCCA
ATTTATGAAG CACGTCCAGT CCATACTGTT TTGTATATTC CTAATGAACA GCAAGCGAGA
ACAATAACTG CTAAATATGT AATTGCTGGT GGCAATAATA ATGGTCAAAA GTTTGCACCT
GATTCGCAAA TTCAAATCTT CTATGGCCGA ACTGGTACTT TAAATGTTGC CAACAATAAG
ATTACTTATG GAAATTGGCA GTGGGACAAT ACAGCAGGCG ATCAAGATAC ACCTGGATTC
CACGTGATTT CAGGATCGTG GAGTTTGCCT ACAAATGGAT CGTCTTGGCA AGTTAATATT
CCTAATTCAG GTAACGACTA TGTTGTTGCA AATTTACGTT ATGATGGAGC ATATTCAACT
TTTACTTTAG CAGCGCCAAG TTATAATGCT AATGATGTGT TTACTAGCTC TACAAGTGAT
CAATGGTTCA CCCGTAATAC ATTAGTTACT TACTATGTGC CAACTTCAAT GGTGAATAAA
ACAGTAACGC GGACAATTAC GATTTTTGAA CCCGGCCAAG GTAGTAAGAC CATAACTCAG
ACTGCTAAAT TGACTAGACA GGTAAGAGTT AATAACGATG ATACCGGTGT TGTTTATGAT
GGCTTTGCAG GTAGCGGCTG GAGTACTGGC ACTTGGGGAG CTCAAGATGT TACAACTCAT
GACGGCTACA CGATGTCTGC AACCCAAACA GTTAATGGAG TTACTACTCC AATTCAACTT
GTTAACGGTC AAGTTCCAGC TGAAGAAGTC GATGGTAATA CCAAAAATAC TACAATTAAT
ATCACTTGGG GTGCTGTAGC TACAGCTACA TTAACTGGTA ATGGCACTAG TACTTATAAT
GGCCAAGCTA TTACTAATGC TGAACTTAAT AATGCTTTGA AAGTGAATGT TACAGGACCA
ACTGCAGGCG CAGGTACGTA TACTCTTCAA GCCGGCGATG TTGAATTTTC AACTGATGGT
ACAAACTGGA CTACTGCCTT ACCAATCAAT GCTGGCAACT ATCAAGTTCG TTTAACTGCT
CAAGGTAAAA ATGGCATTAT TGCTAAATAC GGCAACAACA GTATTATTTG GACTCAAAAT
GGTCAGTCAA CTATCACCAG CAATGCAACT TACATGATTA ATAAGCTTGC TGGTAATGCC
GTGATGACTA ATGCCCAGAT CGGCAATTAC GAGATGACTT ATAATGGTGC TGCTCCAAGT
ACAATTGATC CAAGTAAGTT TGTCTTTACA ACGACTGTCA ATGGTCAAAA CGTTGAGCTT
GATACCACTG GCTTAGATAG CAGCGACTTT ACTTGGGTTG ATAGCAATGC ACCAGTTAAC
GTGGGTACTT ACAAGGTTAT TCTAACTGAT GCTGGTTTAG CTAAATTAAA TGTTAATAAT
CCAAACTTTA ACCTAAGTAA TTCTGGTAAT GGTACTTTCA CAATTAACCA GGCTAATGCT
TCAGCTACTC TTTCAGGTAG CGCAAGTCGT GAATACAATG GTCAAGCAGT CAGTGTTGAT
GATCTCAACT CAACTAGTAC TGGTAACAAC ATTACTTTGA CCTTGCATTA TCCAAAGGAT
GGTAATGCTA ACTATTCAAC TACAGTTAAA TTAAATGCTG GCTACTTTAC TTGGAATACA
CCAAATGGTC AAGCTCCAGT TAATGTAGAT AGTCAACCTT ATACAATTAG TTTGAATTCA
GATGCAATTG AAAGAATAAT TAAACAAGCT GTTGGTAACG GTCAAAATGA TGTAAGTAAC
GTTAAGTTTG CTAGTGATGC AATTAGTGGT AGTGCAAATT ACACAATCAC ACCATTAGAA
AGTTCAGCAG AACTTTCTAA TATTACTAAT GGTAATTACA CGAAAGTTTA TAACGCTGAA
ACTACTAACC AGATTGATGC TTCGAAGTTG CACATTACTG CAAATCTTGG CGGTCAAAAT
GTGGACTTAG ATACTACAGG AATCACTGGT AGTGACTATC AATGGGTTGA TGCAAGTGGT
GCAGAATTGA CTTCTAATCC AAAGAACGTT GGTACTTACT ACATCAAGTT AAGCGATACT
GCTTTTGCTA GATTGCAAGC ACAAAACCCT AACTTCAAAT TGACAAGTAA CGACGGATTA
GGTGTTTATA CGATTACACC AGCTACTGCT AATATTACTT TTGGCGGTAC TAACTCTCGT
GTTTATAACG GTCAAGGTAC CACTACTACA GAAATTAACA GTAACGGTCA AATTAAAGTT
CACTTTACTT TCCCGGGCTC AGTTTTAGAT GCCTCTTATA CGCTTAAAGA TCGTGATTAT
TACTTGGTTG ATCAGGATGG GGCTGGTTAT GATGGTGCTC AAATAATTAA TGTTGGTACT
TATACGATTA AGCTGACCCA ACAAGGGATG CAAAATGTCA TTGATACGAT TCATCAACTA
TCAGGTAGTG GCGATGGCGG CTATAACATT AATGTTGACT CCGCAACTCA ATTGGGTAAT
TTGACTTCAA CATTTGATAT TGTTCCTTCG CAAAATACGA TTAGCGTTTC TGGTACACAA
ACTGAAACCT AG
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| Protein sequence | MKGQAKMLFN KKDFDSKQRF SIRKLSVGVC SVLLSTLFLT FNEGQTVHAS TDANAADTTT
TSVSSNTTNN SSDNNTDKKD DSKVETSSLA TAEKHAPIPI AAEVKSNKSE DQTNSATTET
ATQVSKSKQA QSQTTTNIVK ATATQASTSS KDSSDTTRFK DNSAQNTVEK NRSTSTSKYT
PVLTSETSVS TKTNQSNSNS ATQEKSNIKP VTPHADSTEH IAPKTYSMDS DSPAYVVAGS
DLTNLASKFI SNADVLTQNG ATFSWVGNVP TPTQQDAIGG NTITGTIKVT YKDGTSITID
IESYVEARSE LQPSTFYYVN RVGDTPDFNT ADANGNNFST ILKNTDVYDP TAFSYKILGT
LDTSSLGIHW ANVQVTDNNT FAGAPDAPKV IGGLYIVKVP YVVQGLKLKD NIPTDANGNP
IINAQLATMP KSTSTTPTTP EAAFDPVHGN STNFPAGLWG QYFYQDYALA YALGIKVQVA
ADDLDNNGKW KNKPTDLVNT KTNHFAMTFN KLPNATQQEV DVNYVSAPHA EDMYIYNAAN
KTYMTGRPEN AQAIKELLAD GYMNDKVWVT LADGTKVYAS KLDYLNNGNN FVVGGAKAGR
YNINFNASFD QKNSAGQPQI FSNNIFNTAS ADFNDDLNKW YRKTNNQTVA NYAAPTAATW
DKVSTNGISL APTIKASDDP YEQDLTDGPV TFDSEALKNV VKNPSTGAEV RKVQHTWLAN
MVPNSILDNN TKWPEGTKLT WAGNDGSTKL TFDKAGESKT GNVTITLPSG SSYTVKDITV
ISKANVIAKS ETVDYGKKLT AADLVTNQNV FPAGTTYQFV DGSEPTWGTA GSYDHVKITA
TYKDASGASV NTPVANCAVA INDSRSIKVL AGSDVPSVDS VLNLPNNWEE HTAFWTTPIN
TTATNEGLIT IHYPSSNLDQ KIKVYVTVIP KTSAVDGQNF FTNGNKYDGT EGSIANGANQ
GAILTQANGQ AIDYTTYSGS NTPGTQTSYD TKTTSYTPTY GLSGLQTNSD GSLVSGVQTA
TVRVSVPKGT IGAKVDADDN YYYELNAKVN IAQPVTFEFV DEYNNDQVVG QTYSQEFVPG
IDTNLNFSMA MPDGYELGNG ASIPSQYTLP AFSQTTPVVK VPIHQKMHFY ITFHDEDSNT
NLGTVEVSGS AAAGTGGYYP SINTKLTFPA GADAGDYYSV STSGVPDGVQ LVGSYGVSLT
NPTADWTTPN YQWENTFSVL KALTGATMTI NLKHKFNETQ EKQTRTATVN YVKAKVNADG
TYTQDGNAFT SAVLDVYYSR TKSEDLVTKK ITYTPWLWDT NQGDRTTPGY HVESGKWTSL
PQHWAAVVAD VPTLAGYTAA TVTDKSGKPA NQFVFPTWNG SDQDTSNINK ESLAYTENAP
IYEARPVHTV LYIPNEQQAR TITAKYVIAG GNNNGQKFAP DSQIQIFYGR TGTLNVANNK
ITYGNWQWDN TAGDQDTPGF HVISGSWSLP TNGSSWQVNI PNSGNDYVVA NLRYDGAYST
FTLAAPSYNA NDVFTSSTSD QWFTRNTLVT YYVPTSMVNK TVTRTITIFE PGQGSKTITQ
TAKLTRQVRV NNDDTGVVYD GFAGSGWSTG TWGAQDVTTH DGYTMSATQT VNGVTTPIQL
VNGQVPAEEV DGNTKNTTIN ITWGAVATAT LTGNGTSTYN GQAITNAELN NALKVNVTGP
TAGAGTYTLQ AGDVEFSTDG TNWTTALPIN AGNYQVRLTA QGKNGIIAKY GNNSIIWTQN
GQSTITSNAT YMINKLAGNA VMTNAQIGNY EMTYNGAAPS TIDPSKFVFT TTVNGQNVEL
DTTGLDSSDF TWVDSNAPVN VGTYKVILTD AGLAKLNVNN PNFNLSNSGN GTFTINQANA
SATLSGSASR EYNGQAVSVD DLNSTSTGNN ITLTLHYPKD GNANYSTTVK LNAGYFTWNT
PNGQAPVNVD SQPYTISLNS DAIERIIKQA VGNGQNDVSN VKFASDAISG SANYTITPLE
SSAELSNITN GNYTKVYNAE TTNQIDASKL HITANLGGQN VDLDTTGITG SDYQWVDASG
AELTSNPKNV GTYYIKLSDT AFARLQAQNP NFKLTSNDGL GVYTITPATA NITFGGTNSR
VYNGQGTTTT EINSNGQIKV HFTFPGSVLD ASYTLKDRDY YLVDQDGAGY DGAQIINVGT
YTIKLTQQGM QNVIDTIHQL SGSGDGGYNI NVDSATQLGN LTSTFDIVPS QNTISVSGTQ
TET
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