| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0124 |
|---|
| Symbol | |
|---|
| ID | 4440548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 138442 |
|---|
| End bp | 138918 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639671985 |
|---|
| Product | nucleoside 2-deoxyribosyltransferase |
|---|
| Protein accession | YP_813974 |
|---|
| Protein GI | 116628802 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00000000000082842 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAC AAAAGACAGT TTACTTTGGT GCTGGTTGGT TTACTGAAAC ACAAAACAAG
GCTTACAAAG ATGCAATGAG CGCTTTAAAT GCTAACCCAA CTATTGATTT AGAAAACAGC
TATGTTCCAC TTCAAAATCA ATACAAAGAC ATTCGTGTTG ATGAACACCC TGAATATTTA
CACGACAAAG AATGGGCTCA AGCAACTTAT AGCGGTGACT TAGTTGGAAT TAGGACTAGC
GATGTTATGC TTGGCGTTTA TGTTCCTAAG GAAGAGGACG TTGGCTTAGG AATGGAATTA
GGATACGCTA TGTCTCAAGG TAAATACGTT TTACTTGTAA TTCCTGATGA CTTATACGGT
GAATCAATCA ATTTGATGAG CTGGGGCGTT GCCGACAACG TAATCAAGAT GAGTGAATTA
GCAACATTTG ATTTCAACCG TCCAAGATAC AACTTCTACG ATGGTGCTGT ATATTAA
|
|---|
| Protein sequence | MTKQKTVYFG AGWFTETQNK AYKDAMSALN ANPTIDLENS YVPLQNQYKD IRVDEHPEYL
HDKEWAQATY SGDLVGIRTS DVMLGVYVPK EEDVGLGMEL GYAMSQGKYV LLVIPDDLYG
ESINLMSWGV ADNVIKMSEL ATFDFNRPRY NFYDGAVY
|
|---|
| |