| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0108 |
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| Symbol | |
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| ID | 4440480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 121095 |
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| End bp | 121814 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639671969 |
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| Product | transcriptional regulator |
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| Protein accession | YP_813958 |
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| Protein GI | 116628786 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.25697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00000000000163361 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAAGCG ACCATAATTT TGAAGAACTC GAGGCCCCAG CAAAAACGGC GGAGGAACTT
CATATTAGCG TAGCAACATT AAGAAAGTAT TCTTTAATTG TTGAAAAAGT TACTGGAAAT
AAAGACTACT ATGAAAGGAC TAAGCAGAAG TCTCGGCTAT ATTCAGCTAA AGACATTGAA
GACTTAAAAG CTTTCAAGGC TCTGTCTAAA AAAGCTGATC TGACTTTACA GGAAGCAGCA
AGACAAATTT TTGCAGTGAG TGATAAAAAA GCTGAAGAGG CTAAAAAGGC TGCAAAAGTG
CAAAAAGAAG TTGCAACTAA GACTGCTACT GTAGATGCTG ATCAAGTAGT TAAACTTTTA
ACTATGCTAC AAAATACGAT TGCAAGTCAA AATCAAGCAA TTCAGGATTT GCAAAAGCAA
GTAGCGCGCG TTGAAGCTCA AAATAAAAAG TTAATTGATC GATCACACCA ATTAGCTGAG
CCAGAATCAA CAGATTCACA AAAGGAAGTT CAATCCAATA AAGATCAGGA AGCTGCCAAT
AATATTACTG AAGAACAGAA AAGTGACCAA GAAGTTCATG AAGAAATCTT AAGAAAAGCT
AGAGAGAACG AAGAAAAGCG TCGTAAACAA AAAGTAGAAG AAAATATTCA TCGTACTTTA
GCTCAGATGC AAATTCGTCC CAAGAAAAAA CACCATTGGT GGGATCGCTT TTTTAATTAA
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| Protein sequence | MASDHNFEEL EAPAKTAEEL HISVATLRKY SLIVEKVTGN KDYYERTKQK SRLYSAKDIE
DLKAFKALSK KADLTLQEAA RQIFAVSDKK AEEAKKAAKV QKEVATKTAT VDADQVVKLL
TMLQNTIASQ NQAIQDLQKQ VARVEAQNKK LIDRSHQLAE PESTDSQKEV QSNKDQEAAN
NITEEQKSDQ EVHEEILRKA RENEEKRRKQ KVEENIHRTL AQMQIRPKKK HHWWDRFFN
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