Gene LEUM_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_1236 
Symbol 
ID4423001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp1230162 
End bp1230998 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content34% 
IMG OID639674933 
ProductABC-type amino acid transport system, periplasmic component 
Protein accessionYP_818707 
Protein GI116618336 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGCTC CACGTCAAAA AAAGTCACAC AATAATATTG TGTATATTGT CTTAGGTGTC 
GTTATTGTAG GGATTGTCAT AGGCACAACA AAATTGGTGG GACATTCAGC AACCACCAAA
AGTAAATCAG AAAAGAAAAT ATCAGTATTA ACGTATGCTA ACTGGAACCC GTTTGAATAC
ATAAAAAATG GTAAGGTTGT TGGGTTTGAT TTAGATATCT TAAAATCTTT GTCTAAAGAA
GCGGGCTATC AGTATACGAT TAAGAATACT GGTTGGGACT CGATGTTTAC ACAATTAAAT
TCTGGTTCAG CTGATGCAGC TATTTCTGGT ATTACAATTA CAAAAGATCG TCAAAAAACA
TATTCGTTTT CAAAGCCTTA CTTTGTTTCT CGACAGGCAA TCATTGTTAA GAAAACTGAC
ACAGTAATTA AAAATGCAAC TGATCTGAAG AATAAAAAAG TTGCTGTTCA GCTAGGTTCA
ACCGGAGAGG AAGCTGCTGA ATCAATCCTT GGCAAGAATA GTTCAAATAT TAGCAAAGAC
AAAGGCGGCA CAACATTTTT ACAGGTTGTT CATGGGCAAG CAGACGCTGC AATTGGTGAC
GAAACCACTG TTAAAAAGTA TGTGGCAAGT AATCCCTCAT ACAAATTAAA AGTTATTTAT
GACGATAAAA ACTTTGAACC AGAATATTTT GGTTTGATGT TTACTAAAAA TTCAAAATAC
CGTTCAACAT ATAACGCTGC TTTGAAAAAA ATAATTGACA ATGGCGAATA TACAAAAATT
TATGAAAAGT GGTTTGGTAG TAAGCCATCA CTTGATGTCA TAAAGTCACA GCAATGA
 
Protein sequence
MVAPRQKKSH NNIVYIVLGV VIVGIVIGTT KLVGHSATTK SKSEKKISVL TYANWNPFEY 
IKNGKVVGFD LDILKSLSKE AGYQYTIKNT GWDSMFTQLN SGSADAAISG ITITKDRQKT
YSFSKPYFVS RQAIIVKKTD TVIKNATDLK NKKVAVQLGS TGEEAAESIL GKNSSNISKD
KGGTTFLQVV HGQADAAIGD ETTVKKYVAS NPSYKLKVIY DDKNFEPEYF GLMFTKNSKY
RSTYNAALKK IIDNGEYTKI YEKWFGSKPS LDVIKSQQ