Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_1235 |
Symbol | |
ID | 4423000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | - |
Start bp | 1229491 |
End bp | 1230150 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639674932 |
Product | ABC-type amino acid transport system, pemease component |
Protein accession | YP_818706 |
Protein GI | 116618335 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTTA GTTATGAAAT GATTTTAGAT TACGCCCCAT TTTTCATGCA TGGTTTACTA TACACTTTGC TGTTTTCCCT TTGTGGGGTA GTTTTTGGAA CGATATTTGG ACTGATTATT GCACTTGGCC GTATGTCGAA AAACCCCGTT ATTTCTGGAA TATTTAAAAC CTATATTGGT TTGTTTCGTG GCACACCATT GTTTGTACAA ATTTTGATTA CCAACTTTGG TGTCGTACCG GCAATTTTTG GACATTCCAA TCCATATATA GCCGGTGCCC TGTCCTTGTC CCTGAATGCA GCGGCCTACA TTGCTGAAAC ATTTCGTTCA GGTATTCAAT CCATTTCTGA AGGGCAACGT GAGGCGGCTA GAACATTGGG TTTGTCTCAA TTTGATACGA TGCGTTTTAT CATAGTGCCG CAAGCCATAA AGATAGTGAT ACCGGCATTA GGAAACGAAT TTATTAGTTT AATCAAAGAT TCATCTTTGG TATCAGCAAT ATCCGCACCA GAAATTACGT ATTGGGCTCA AGCTATGAAT GCACAATACT ATGTTGTTTG GACGCCATAT CTCACAGTTG CCGTACTGTA TTTGATTTTG ACCTTGTCAG CAAGTCGACT AATGAAACTA TGGGAAAGGA AAATGGCGCA AAATGATTAA
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Protein sequence | MSFSYEMILD YAPFFMHGLL YTLLFSLCGV VFGTIFGLII ALGRMSKNPV ISGIFKTYIG LFRGTPLFVQ ILITNFGVVP AIFGHSNPYI AGALSLSLNA AAYIAETFRS GIQSISEGQR EAARTLGLSQ FDTMRFIIVP QAIKIVIPAL GNEFISLIKD SSLVSAISAP EITYWAQAMN AQYYVVWTPY LTVAVLYLIL TLSASRLMKL WERKMAQND
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