Gene LEUM_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_0788 
SymbolglyA 
ID4422621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp765674 
End bp766906 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content41% 
IMG OID639674496 
Productserine hydroxymethyltransferase 
Protein accessionYP_818270 
Protein GI116617899 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0984915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATATC AAGAATTAGA CCCTATTGTC TGGAGTGCGA TTCAACAAGA AAGTGCGCGT 
CAAAACCGTA CAATTGAATT AATCGCTTCT GAGAACTTTA CATCGCAAGC CGTACGTGCC
GCACAAGGTT CGGTGTTGAC AAATAAGTAT GCTGAAGGAT ACCCTTATAA GCGTTATTAT
GGTGGCACGG AGTACGTGGA CGTTGTTGAA CAGGTAGCCA TCGATCGTTT AAAAGAACTT
TTTGGTGCTG AATATGCTAA CGTTCAGCCG CATTCTGGTT CCCAAGCGAA TGCTGCTGCT
TACATGGCAT TTTTAAAGCC AGGTGACAAG ATATTGGGTA TGAGTCTTGA CGCTGGTGGA
CACTTGACAC ATGGGGCCAA GGTCAGTTTC TCTGGAAAAG TTTATGAATC ACATACTTAT
GGATTAAATT CGGAAACAGA AACCTTAGAT TATGAAGCAA TTGCCAAGCA AGCACGTGAA
GTAAAACCAC AGATGATTGT GGCCGGTGCT TCTGCATATT CACGAATCAT TGAATTTGAT
AAGTTTCGTG CGATTGCTGA CGAAGTGGGT GCCTATTTAA TGGTTGATAT GGCGCATATT
GCCGGACTTG TAGCTGCTGG GCTACATCCC AATCCAGTAG GCATTGCAGA TGTTGTTACA
TCAACAACAC ATAAAACATT GCGAGGTCCG CGTGGTGGGG TTATTCTATC ACAGGAAAAG
TATGCTAAGC AGCTTAATTC AGCTATTTTC CCTGGATCAC AAGGTGGACC ATTGGAACAC
ATTATTGCAG GTAAAGCAAT TGCCTTTGGA GAAGCTTTAC AACCTAAATT TAAAGACTAC
GCACAACAAG TTATTAAAAA TGCGCAAGCT ATGGCAAAAG TTTTCAATGA TACTGAAGAT
ATTCGTGTTG TAGCTGGTGG CACTGACAAC CATTTATTCA ATTTGGACCT AACTAAAACA
GCGTTAAATG GTAAGCAAAC ACAGGAATTA TTAGACACAG TTTCAATTAC TACAAACAAA
GAAGCTCTGC CAAATGAACA ATTAAGTCCA TTTGTTACAT CTGGTATTCG TATTGGAACT
GCAGCAATCA CAACGCGTGG ATTTGATGAA GATGATGCCA CTAACGTAGC CGAATTGATT
GTGACAGCCA TTCATCATTA TGATGATGAA AAAGTACTCA AGCAAGTGAA ACGTGAAGCT
GAAGCATTAG CAATGACGCA TCTATTTGAA TAA
 
Protein sequence
MSYQELDPIV WSAIQQESAR QNRTIELIAS ENFTSQAVRA AQGSVLTNKY AEGYPYKRYY 
GGTEYVDVVE QVAIDRLKEL FGAEYANVQP HSGSQANAAA YMAFLKPGDK ILGMSLDAGG
HLTHGAKVSF SGKVYESHTY GLNSETETLD YEAIAKQARE VKPQMIVAGA SAYSRIIEFD
KFRAIADEVG AYLMVDMAHI AGLVAAGLHP NPVGIADVVT STTHKTLRGP RGGVILSQEK
YAKQLNSAIF PGSQGGPLEH IIAGKAIAFG EALQPKFKDY AQQVIKNAQA MAKVFNDTED
IRVVAGGTDN HLFNLDLTKT ALNGKQTQEL LDTVSITTNK EALPNEQLSP FVTSGIRIGT
AAITTRGFDE DDATNVAELI VTAIHHYDDE KVLKQVKREA EALAMTHLFE