| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_0399 |
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| Symbol | |
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| ID | 4422283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008531 |
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| Strand | + |
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| Start bp | 356467 |
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| End bp | 360006 |
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| Gene Length | 3540 bp |
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| Protein Length | 1179 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639674110 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_817894 |
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| Protein GI | 116617523 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTAA TAGACTTTTT AAGTGACACA GTAACAATTA AAAAACTTAA CGAACAGGCA
ACTGTGGGCT CAGCACAGTT GCTTTTAGGC GTGAATGGCA CCGCTCGTGC GGCTAGTATT
GCTGCCTTAT ACCGTAAAAA TCCCCGACCA ATGTTGATTA TATCTGACAC GCAAGTGCAT
GCTGATCAAT TTTTCGATGA TCTGTCATCT TTGCTTGAAG ATCTGGTCTA CAACTTTCCA
GCAGAAGAGT CTATTGCCAC AGAAATGGCA ATTAGTTCTT CTGAATTACG ACTACAACGC
GTACAAACAT TACTTGCCTT AAAAACAGAA AAACCTATTA TTGTGGTTAC AAGTTTGGCA
GGTGCAGAAC GTTTGGTACC TAAAAAGCAG TCACTGGAAC AAGCACATTT ACATGTTAAA
GTTGGGGATG CTTACAATTT GAATGTCATT AAAAACACTT TAATGATGAT GGGATATACA
CCAACTAAAT TAGTTCAAAC ACCAGGTGAA TTCGCACATC GAGGATCAAT TGTTGATGTT
TATCCAATTA CCTTTGATGA TCCTATTCGA CTTGACTTTT TTGATGATGA ATTGGACCAA
TTAAAGAGCT TTGATGTTGC GACCCAAAAA AGTACCACTA GTTTTGACGA AATCAATATT
GAACCGGCGA CAGATTTTAT CGTATCAGAG CATCAGTATG ACCAGGCTAA GTTAGCGATT
GAAAGCGCTT TTAGCGATTA CCGCACCAAT CTAAGCGGGG TTGATAAAAA GCATGCCACG
GATGGCTTTG CTCCCACACA GTATATGTTG AACGAACGAG AACGAGGTAG TGTGTTAGTG
CCATATGCTC CTTTTTTCTT TGATGGCCAG ACAACCCTAC TTGACTATTT TCCAACTGAT
TCGTTAATCA TCATTGATGA ATACACACGA TTAATGGAAA CGCGACTTCA GCAAATGACA
CGTGATCAGG AATGGATTGA GCAGCAAATT GAAGCGTATC AGTTATTACC AAAACAAACT
TGGCGAACTG AAATCACCGA TTTATTAGCA AGTAATCAAC ATGCGACAAT CTACTTAGCT
AATTTTCAGC GTGGACTCAA CCGAATTAAG TTTACCAATG TTGAAGAAGT GACAACGCGC
CCAGCAAATC AGTATTATGG ACAAATTCCT GCCTTGAAAA ATGATTTAAT ATATGCACAG
GAATCTGGTA TTACAATGGT GTTATTAATT CCTGACGCTA AACGACGGGC TAACTTTTCT
CGTAGTTTAT CTGAATTAGA AGTACCGGTC ACTGAGACGC GAGATATAGT GAAAAACCAA
GTACAAATTA TGCCAGGTGA GCTATCAGCT GGATTTGAAT GGCCAAAATT ACATTTGACC
GTACTAACTA CACATGAACT ATTTACACAA GCAAAGCATT CCGCACCGCG AACCCGCAAA
ATTGCTAACT CAGAGCGTTT GAAATCTTAT AATGAATTGA ATGTGGGCGA TTACGTTGTT
CATATTAATC ATGGTATTGG TCGCTATGAA GGCTTGCAAA CAATTGAAGC TGACGGTGGA
AAACAGGATT ATCTAACAAT TGCTTATCAG CAAAATGCGA AAATATTTAT TCCTGTCACA
CAACTTAATC TTATTCAAAA ATATGTTGGT GCATCTGATG TTGCTAAGAA ACCTAAGTTA
AACAAATTGG GTGGTAGTGA GTGGGCTAAA ACAAAAAGAC AAGTTGCGGC AAAAATTGAA
GATATTGCTG ATGATTTATT AGAGTTATAC GCTAAACGTG AAGCGCAGCA AGGGTACGTT
TTTCCACCGG ATGATCATGC CCAAATTAAG TTTGATGATT CTTTTGGTTA CCCAGAAACA
CCTGATCAAA TTCGCAGTAT TGAAGAAATT AAAGTTGATA TGCAAAAGCT GCGACCAATG
GACCGGTTAC TTGTGGGAGA CGTTGGCTTT GGAAAAACTG AGGTTGCCTT GCGTGCTGTT
TTTAAAGCTG CTCATTCTGG TAAACAAGTC GCCTTTCTAG CGCCAACTAC AATTTTGGTT
CAACAACATT ATGAAACAAT GTTGGCTAGA TTTAGTGATT TTCCAGAAAT TAAAATTGGC
GTATTAAGTC GTTTTCAAAC GCCAACCCAG AACAAAATGA TTATTGAGCA GCTTCAAAAT
CACGAAATCG ATGTAGTTGT CGGTACGCAC CGTTTGTTGA GCAAAGATGT GGACTTTTCA
GATCTTGGTT TACTAATCAT AGATGAAGAG CAGCGGTTTG GTGTTAAACA TAAAGAAAGA
CTAAAACAGT TACGAACAAG TGTTGATGTC CTAACATTGA CTGCAACACC AATTCCACGT
ACGCTTAATA TGGCTATGGT GGGCGCCCGT GATTTATCTG TCATTGAAAC ACCACCTGCA
AACCGATATC CAATTCAAAC TTATGTTTTG GCAATGGATT GGAAAATAGT TCGTGATGCG
ATTGAAAAAG AAATTACACG TAACGGTCAA GTTTTTTATC TACACAATCG TGTTGCTGAC
CTAGACCGTA TTGTTAGTCA AATAGAAGAA TTAATTCCTT CGGCGCGTGT AGCTGCAATT
CATGGGCAGA TGTCAGAAAC ACAGCTTGAA AGTATCCTAT ATGACTTTTT GAATGGACAA
TATGATGTTC TAGTAACAAC CACAATTATT GAAACAGGTG TCGACATCCC TAATGCAAAT
ACTTTAATTG TCGAAAATGC TGACCATATG GGGTTGGCAC AGCTTTATCA ATTGCGTGGT
CGTGTTGGGC GTTCGACACG TTTAGCGTAT GCATATTTTA CTTACCCATT TACGCGTACA
CCCTCAGAAG AAGCCGAGAA AAGACTTGAG GCCATACGCG ATTTCACGGA ACTCGGTTCA
GGTTTCAGAA TAGCTATGCG TGATTTAAGT ATTCGTGGTG CAGGTGATTT GCTCGGTAAA
CAACAACACG GATTTATTGA TTCAGTGGGT TATGACATGT ATACTCAAAT GTTGAAAGAT
ACTGTGGCAC AAAAACAGGG AAAACAAGTT ACGGCAAGCC AACCAGAAAC GGATGCAGAA
TTAATCTTAG GTGTGCTAGC TTATTTGCCA GATGAGTACG TTAGTGATAA TGCACAAAAA
ATTGAATTAT ATTCTCGCAT TCGTCAGGCT AGAACTGATG CAGAATTTGA AGACATTGAG
TCTGATATGC TTGACCGATT TGGTGAAATG CCAGATGAGG TGGCCCGATT ATTGCTCGTA
GGTCAAATTA AGCAGTTAGC TGATCAGTCA CAAATTACGA ATATACGACG CCAAAGAAAA
CAATTAATTA TGACATTTAA TGAAACAGCT ACGAAAAACT TAGCTGGAGA AGCCATATTT
GAGACAATGG TTGACGTGCC GTTAAAAGCA GCTGTACGAA CAGAAGAAGG TAATTTACAA
GTGATCTTCA CTGTGAACGA TGTCGCAGAA AGTAGTATCT GGCTCAATAT TTTACGGAAC
TTTTTGTTAG TCATTATTAA TAAATTATCA GCAAAAACAT TAAATGAACT TCATCATTAA
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| Protein sequence | MTLIDFLSDT VTIKKLNEQA TVGSAQLLLG VNGTARAASI AALYRKNPRP MLIISDTQVH
ADQFFDDLSS LLEDLVYNFP AEESIATEMA ISSSELRLQR VQTLLALKTE KPIIVVTSLA
GAERLVPKKQ SLEQAHLHVK VGDAYNLNVI KNTLMMMGYT PTKLVQTPGE FAHRGSIVDV
YPITFDDPIR LDFFDDELDQ LKSFDVATQK STTSFDEINI EPATDFIVSE HQYDQAKLAI
ESAFSDYRTN LSGVDKKHAT DGFAPTQYML NERERGSVLV PYAPFFFDGQ TTLLDYFPTD
SLIIIDEYTR LMETRLQQMT RDQEWIEQQI EAYQLLPKQT WRTEITDLLA SNQHATIYLA
NFQRGLNRIK FTNVEEVTTR PANQYYGQIP ALKNDLIYAQ ESGITMVLLI PDAKRRANFS
RSLSELEVPV TETRDIVKNQ VQIMPGELSA GFEWPKLHLT VLTTHELFTQ AKHSAPRTRK
IANSERLKSY NELNVGDYVV HINHGIGRYE GLQTIEADGG KQDYLTIAYQ QNAKIFIPVT
QLNLIQKYVG ASDVAKKPKL NKLGGSEWAK TKRQVAAKIE DIADDLLELY AKREAQQGYV
FPPDDHAQIK FDDSFGYPET PDQIRSIEEI KVDMQKLRPM DRLLVGDVGF GKTEVALRAV
FKAAHSGKQV AFLAPTTILV QQHYETMLAR FSDFPEIKIG VLSRFQTPTQ NKMIIEQLQN
HEIDVVVGTH RLLSKDVDFS DLGLLIIDEE QRFGVKHKER LKQLRTSVDV LTLTATPIPR
TLNMAMVGAR DLSVIETPPA NRYPIQTYVL AMDWKIVRDA IEKEITRNGQ VFYLHNRVAD
LDRIVSQIEE LIPSARVAAI HGQMSETQLE SILYDFLNGQ YDVLVTTTII ETGVDIPNAN
TLIVENADHM GLAQLYQLRG RVGRSTRLAY AYFTYPFTRT PSEEAEKRLE AIRDFTELGS
GFRIAMRDLS IRGAGDLLGK QQHGFIDSVG YDMYTQMLKD TVAQKQGKQV TASQPETDAE
LILGVLAYLP DEYVSDNAQK IELYSRIRQA RTDAEFEDIE SDMLDRFGEM PDEVARLLLV
GQIKQLADQS QITNIRRQRK QLIMTFNETA TKNLAGEAIF ETMVDVPLKA AVRTEEGNLQ
VIFTVNDVAE SSIWLNILRN FLLVIINKLS AKTLNELHH
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