Gene LACR_D19 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_D19 
Symbol 
ID4405872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008506 
Strand
Start bp21073 
End bp22032 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content38% 
IMG OID639654620 
ProductABC-type dipeptide/oligopeptide/nickel transport system, permease component 
Protein accessionYP_796546 
Protein GI116326626 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAAAG TAATTATTAG ACGTATTTTA TTGATGATCC CTCAATTATT TATCTTGAGT 
ATTCTTGTTT TCTTCTTTGC TAAATTGATG CCTGGTGATC CTTTTTCAGG GTTGATTGGT
CCTCATACCG ACCCACATGA AGTTGAAGCA TTAAGACGGG CAGCAGGTTT ATATGACCCT
TGGTGGGAGC AGTATCTCAG GTGGCTAGGG AATGCCATAC ATGGGAATTT AGGAATGTCC
TATAATCTCA AAGAGCCTGT GATGACTGTC ATTGGACATA GAGCGATTAA TACTTTTTGG
ATGTCACTTT TGTCAGTTAT TTTAACTTAC TTATTTGCTA TTCCGATGTC GATAGTTGCA
GCTCGAAATG AAGGAAAATG GCAAGACCAA TTGTGGTTGA CCTATAATTC AATTACTTTT
GGTATTCCAC CTTACGTATT CTATCTCTTG ATTATCTTTA TCTTTGGTTA TAGTCTTAAT
TGGTTTCCGA CAGGTGGGAC GGTAAGTCCA GATGCGATGG GAATAATTCC TGTTTTCTTT
AGTAAGATTT ATCACATGAT TCTTCCGGCT TTTAGTTTGG CGGTCTTTGG AACAGTTGGA
ATCTTTACTT ACTTCCGCTC AGGAATTTTA GATGAACAAA CACAAGATTA TGTACGAACG
GCTCGAGCCA AAGGGGTTAA GGAAAAAGTG ATTTTTAGAC GTCATATTTT GAGAAATGCC
TCATTACCAA TTGCTTCTAA TTTTGGATTT GTGATTACTG GACTCTTGGG AGGAGCAATC
TTTGCTGAAA CAATTTTCGG ATATCCTGGC TTAGGACAAC TTTTTATTAC TTCAATCAGT
GGGCGAGATT ATTCAATGAT TACGGCTTTG ATTTTATTAA ATGGTTTTTT GGGACTTCTT
GGAGCCCTCC TGTCGGATAT TATCATGGCA ATGGTTGACC CACGAATTCG GATTCAATAA
 
Protein sequence
MWKVIIRRIL LMIPQLFILS ILVFFFAKLM PGDPFSGLIG PHTDPHEVEA LRRAAGLYDP 
WWEQYLRWLG NAIHGNLGMS YNLKEPVMTV IGHRAINTFW MSLLSVILTY LFAIPMSIVA
ARNEGKWQDQ LWLTYNSITF GIPPYVFYLL IIFIFGYSLN WFPTGGTVSP DAMGIIPVFF
SKIYHMILPA FSLAVFGTVG IFTYFRSGIL DEQTQDYVRT ARAKGVKEKV IFRRHILRNA
SLPIASNFGF VITGLLGGAI FAETIFGYPG LGQLFITSIS GRDYSMITAL ILLNGFLGLL
GALLSDIIMA MVDPRIRIQ