Gene LACR_A10 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_A10 
Symbol 
ID4405779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008503 
Strand
Start bp10600 
End bp11490 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content32% 
IMG OID639654534 
Productreplication initiator protein 
Protein accessionYP_796461 
Protein GI116326538 
COG category[L] Replication, recombination and repair 
COG ID[COG5527] Protein involved in initiation of plasmid replication 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00000639536 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCACG AAATTGTACA ATATCATAAT GATTTTAATA CTGTTCCACT TCGTGGATTT 
AATGAACGTG AAAAACGAAT TGTGATGGCT CTACTCCATG AAGTCAAAGG AAAAGATACT
CAAATTGTTC AATTAGATTT CCATACATTG CGTGGTTTAA CTGGTTGGGA TGAAACAAAT
CATAAAGGAG CTAATTCTAA TGCGGAATTT GTTAAATATT TAGAAATTCT ATCAGATAAA
ATTATGACTT TAAGAGGAAC TTTGAGAAGT GATGATGGAC TACAAATTGT TAAATTTAGT
TTATTTCCGA CTTTTATCAT AGACGGAAAA AAAACAAACA CCCTTAAAGT TTCTATAAAC
CCTGAATTTA AGTATCTTAC AAATCTTTTC GATATGTTTA CCGCTTTTGA ATTAGAAGAT
TATAATAAAA TGCATACTAG CTATGGACAA GAGCTCTATC GATTAATCAA ACAATTTCGA
ACCACTGGTT TTTATCGTGT AAAAACTGAA GACTTAAGAC ATCTTTTATC AGTTCCTAAA
AGCTATACTA ATGCTGAAAT GGATAGAAAA GTTTTTTCAA AAACAACCGT ATCTGATCTC
ACAAATGCTT TCTCTAACTT CAAAATTAAG CAAGAAAGAG GTACAGGTCG AGGTCGACCA
ATTATTGGAT ATACCTTTAC TTTCGATAAG GAAAAGACCA ATCAATACGA GATTGACCGT
AAAAAAGAAG AACAAATCGC TCAATTTTGG AAATCTGATG AACCTGAACC CATGCCAAAT
GCCGTGGCTC AAACCGAATA TCAAAATCCT GAATTACGCA AACAAAAAGA AGAAACAGAC
AGGCATAGCG CTGGATTTGG CGATTTATTA AAAGGTTGGT TTAAAAAATA A
 
Protein sequence
MAHEIVQYHN DFNTVPLRGF NEREKRIVMA LLHEVKGKDT QIVQLDFHTL RGLTGWDETN 
HKGANSNAEF VKYLEILSDK IMTLRGTLRS DDGLQIVKFS LFPTFIIDGK KTNTLKVSIN
PEFKYLTNLF DMFTAFELED YNKMHTSYGQ ELYRLIKQFR TTGFYRVKTE DLRHLLSVPK
SYTNAEMDRK VFSKTTVSDL TNAFSNFKIK QERGTGRGRP IIGYTFTFDK EKTNQYEIDR
KKEEQIAQFW KSDEPEPMPN AVAQTEYQNP ELRKQKEETD RHSAGFGDLL KGWFKK