Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_2348 |
Symbol | |
ID | 4433967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 2195021 |
End bp | 2195563 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639668025 |
Product | amidase |
Protein accession | YP_811911 |
Protein GI | 116513004 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0331088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAG CATTACTTAT AATCGATATT CAAAATGATT ATTTTCCAGA AGGCAAAAAT GAGTTGCATG AAGCTGACAA GGCTTTGCTA AAGGTCAATC AACTGGAAAA CAGCTTTTTG TCTGAACAAA AGCCAATCAT TTATATTCAA CACATCAAGC ATCACCTGAA TGCAGATTTT TTTGAAGCAG GGACAATTGG CTGTGAATTA CACCCAAATC TCAAGCTGCA GGAGCAGTCA ATTATCATTG AAAAACATTT TCCTAATAGC TTTTTAGAGA CAGAGTTACT TGAAACACTA AAAAAAATAG AGATTGAGCA GCTGGTCATC TGCGGAATGA TGACACAAAT GTGTGTTGAT TCAACAACTC GAGCGGCAAA AGAACTCGGT TTTCAGCCAG TATTGATTTC GGATGCAACA GCAACAAAAG ATTTGATTTT TGAAAACAAA AAAGTTTTGG CAGAAAATGT TCAGATTAGT TTTCTTTCAG CCTTACAAAA TTTTGCGCAA GTACTGACAG CTGACCAATT CTTGAAAGGA TAA
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Protein sequence | MKQALLIIDI QNDYFPEGKN ELHEADKALL KVNQLENSFL SEQKPIIYIQ HIKHHLNADF FEAGTIGCEL HPNLKLQEQS IIIEKHFPNS FLETELLETL KKIEIEQLVI CGMMTQMCVD STTRAAKELG FQPVLISDAT ATKDLIFENK KVLAENVQIS FLSALQNFAQ VLTADQFLKG
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