Gene LACR_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_2348 
Symbol 
ID4433967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp2195021 
End bp2195563 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content36% 
IMG OID639668025 
Productamidase 
Protein accessionYP_811911 
Protein GI116513004 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0331088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAG CATTACTTAT AATCGATATT CAAAATGATT ATTTTCCAGA AGGCAAAAAT 
GAGTTGCATG AAGCTGACAA GGCTTTGCTA AAGGTCAATC AACTGGAAAA CAGCTTTTTG
TCTGAACAAA AGCCAATCAT TTATATTCAA CACATCAAGC ATCACCTGAA TGCAGATTTT
TTTGAAGCAG GGACAATTGG CTGTGAATTA CACCCAAATC TCAAGCTGCA GGAGCAGTCA
ATTATCATTG AAAAACATTT TCCTAATAGC TTTTTAGAGA CAGAGTTACT TGAAACACTA
AAAAAAATAG AGATTGAGCA GCTGGTCATC TGCGGAATGA TGACACAAAT GTGTGTTGAT
TCAACAACTC GAGCGGCAAA AGAACTCGGT TTTCAGCCAG TATTGATTTC GGATGCAACA
GCAACAAAAG ATTTGATTTT TGAAAACAAA AAAGTTTTGG CAGAAAATGT TCAGATTAGT
TTTCTTTCAG CCTTACAAAA TTTTGCGCAA GTACTGACAG CTGACCAATT CTTGAAAGGA
TAA
 
Protein sequence
MKQALLIIDI QNDYFPEGKN ELHEADKALL KVNQLENSFL SEQKPIIYIQ HIKHHLNADF 
FEAGTIGCEL HPNLKLQEQS IIIEKHFPNS FLETELLETL KKIEIEQLVI CGMMTQMCVD
STTRAAKELG FQPVLISDAT ATKDLIFENK KVLAENVQIS FLSALQNFAQ VLTADQFLKG