Gene LACR_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_2056 
SymbolileS 
ID4432430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp1947570 
End bp1950368 
Gene Length2799 bp 
Protein Length932 aa 
Translation table11 
GC content38% 
IMG OID639667751 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_811648 
Protein GI116512741 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA AAGATACTTT GAACTTGGGA AAAACAGCTT TTCCAATGCG CGCAGGCTTG 
CCAAATAAAG AGCCCAATTG GCAAAAAGAT TGGTCAGATG CTACGCTTTA TGAGAAACGT
CAAGAATTAA ATGAGGGGAA ACCTTCGTTT ATACTCCATG ATGGACCTCC CTATGCAAAT
GGGAATATTC ACCTTGGACA TTCTTTAAAC AAAATTTCAA AAGATATTAT TGTTCGTTAT
AAATCAATGG CAGGATTCCG TGCTCCTTAT GTTCCTGGTT GGGACACTCA TGGTTTACCA
ATTGAGCAAC AACTTGCTAA AGCAGGTATG AAACGTAAAG AAATGGACTT GCTTGACTAT
CTTGAAGAAT GTCGCAAATA TGCGATGAAA CAAGTAGACA TGCAACGTTC AGACTTCAAA
TCACTCGGTG TTTTGGCCGA TTGGGATCGT CCATATCTGA CTTTATTGCC AGAATACGAA
GCGGCTCAAA TTCGCGTTTT TGGGAAAATG GCTGAAAAAG GATACATCTA TAAAGGACAA
AAACCAATTT ATTGGTCACC TTCATCTGAA AGCTCACTTG CTGAAGCTGA AATTGAATAT
CAAGATGTTC GTTCAGCCTC AATTTTTGTG GCATTTAAAG CTAAAGATAC CAAAGGAAAA
TTGCCAGAAG ATGTCGAATT TGTTATCTGG ACAACAACGC CATGGACCAT TCCATCAAAC
TTGGGAATTT TTGCTCATCC TGACTATGAT TATTCAGTTG TGGCGGTTAA TAATCGCAAA
TTTGTGATTG CTTCTGAAAT GCTTGAGGCC GTTGCTGAAA AACTTGAATG GGAAAATCCA
GAAGTTCTTC AAACCCTGAA AGGTTCTGAT TTAGAATACA TGGTTGCTAA GCACCCATTT
TATGATCGTG AAACACTAAT CATGAATGCA GATTACGTCA CACTTGATTC TGGTACTGGA
CTTGTCCACG TTGCTCCTGG TCATGGTGAA GATGACTATT TTGCTAGTCG TAAATATAAA
TTGCCAGTCT TGTCACCAAT CGATAATCGT GGTTATTATA CTGACGAAGC TCCTGGTCTT
GAAGGCGTCT TTTATGATGA TGGAAATAAA ATCGTCAGTA ACTGGCTGGA AGAAAAAGAT
GCTTTATTGA AACTTGAATT CTTCACTCAC AGTTATCCGC ATGATTGGCG CACTAAAAAA
CCAGTCATTT TCCGTGCCAC ACCGCAATGG TTTGCTTCAA TCGATGACTT CCGTCAAAAT
ATTTTGGATG AAGTTGAAAA AGTAGATTGG GTTATTCCAT GGGGTAAAAC TCGGTTATTC
AACATGGTTC GCGACCGTGG GGATTGGGTC ATTTCACGTC AACGTGCTTG GGGAGTACCA
TTGCCAATTT TCTACGGTGA AAATGGTGAA CCAATTATCA CACCAGAAAC AACTGAACAC
GTAGCTAAAC TTTTTGCTGA ATTTGGCTCA AAAGTTTGGT TTGAACGTGA AGCAAAAGAC
CTTCTACCAG AAGGATTTAC TCATCCAGCT TCACCAAATG GTGAATTTAC AAAAGAAAAA
GACATCATGG ACGTTTGGTT TGATTCAGGT TCTTCTTGGA ATGGTGTCCT TAACGAACGT
GACTATCTTA GCTTCCCAGC GGATCTTTAT CTTGAAGGAT CAGACCAATA CCGTGGTTGG
TTCAACTCAT CTATTACAAC CTCAGTGGCG GTAAATGGTG TAGCACCATA TAAAGCAGTT
CTTTCACAAG GATTCGTTTT GGATGGTAAA GGTCGCAAAA TGTCTAAATC AATTGGAAAT
ACAATTGTGC CAAAAGATGT CACTAAGAAA TTTGGTGCCG ATATTCTCCG TCTTTGGGTG
GCCTCAATTG ATACCGAATC AGATGTTCGT GTATCTATGG ATATTCTCAG TCAAGTCTCT
GAAGTTTACC GTAAAATCCG TAACACTTTG CGTTTCTTAA TCGCAAATAC ATCTGATTTT
AATCCTAAAG AAGATGGAAT TGACTTTGCT GAACTTCGTC CAGTAGATAA ATATATGCTT
GTGAAATTTA ATGAACTTGT AAAACAAATC CATAAAGCTT ATGATAATTA CAGTTTTATG
AGTGTATACA AATCAATCAT TAATTTCATC ACTAATGATT TGTCATCGTT CTATCTTGAT
TTTGCAAAAG ATGTGGTTTA TATTGAAGCA GCAAATTCAC CAGAACGACG TTCAATGCAA
ACAGTAATGT ATGTTATTTT GAAAGATTTG GTAAAAGTTC TTGTTCCAAT TTTGCCTCAT
ACAGCAGAAG AAACATGGAC TTACTTAGAG CATGAACCAG AAAATTTTGC TTATCTTGCA
GAAATGCCAG AAGCAGCGGA AATTCCAGGT AGTGAAGAAC TATTAGGAAA TTGGCAAGAA
TTCCTTGACT TCCGTGATAA GATTTTGAAA GCTTTGGAAA GTGCTCGTGA AGCGAAACTT
ATTGGTAAAT CATTGGAAGC AACAGTGACA ATTTATCCAA ATGAAGTTGT ACGTACTTTA
CTGACAGCGA TTGACGAAAA TGTTGCGCAA CTTTTGATTG TATCAAACTT TGTAGTAGCG
AACGGAACTG TAAGTGATGC ACCAGAAGCA GCTATGAAAT TTGATGACCT TGCTGTTCTT
GTGGAACATG CCGCTGGTGA TGTTTGTGAC CGTTGCCGCA GAACTGATGA AACAGTTGGG
CATAACGCCA ATGAAAATCT CAAAATGCTT TGTGAACATT GTGCACATAT CGTTGAAAAA
GAATTTCCAG AAGTCCTTGT AGAAGGCTTT GAAGATTAA
 
Protein sequence
MKIKDTLNLG KTAFPMRAGL PNKEPNWQKD WSDATLYEKR QELNEGKPSF ILHDGPPYAN 
GNIHLGHSLN KISKDIIVRY KSMAGFRAPY VPGWDTHGLP IEQQLAKAGM KRKEMDLLDY
LEECRKYAMK QVDMQRSDFK SLGVLADWDR PYLTLLPEYE AAQIRVFGKM AEKGYIYKGQ
KPIYWSPSSE SSLAEAEIEY QDVRSASIFV AFKAKDTKGK LPEDVEFVIW TTTPWTIPSN
LGIFAHPDYD YSVVAVNNRK FVIASEMLEA VAEKLEWENP EVLQTLKGSD LEYMVAKHPF
YDRETLIMNA DYVTLDSGTG LVHVAPGHGE DDYFASRKYK LPVLSPIDNR GYYTDEAPGL
EGVFYDDGNK IVSNWLEEKD ALLKLEFFTH SYPHDWRTKK PVIFRATPQW FASIDDFRQN
ILDEVEKVDW VIPWGKTRLF NMVRDRGDWV ISRQRAWGVP LPIFYGENGE PIITPETTEH
VAKLFAEFGS KVWFEREAKD LLPEGFTHPA SPNGEFTKEK DIMDVWFDSG SSWNGVLNER
DYLSFPADLY LEGSDQYRGW FNSSITTSVA VNGVAPYKAV LSQGFVLDGK GRKMSKSIGN
TIVPKDVTKK FGADILRLWV ASIDTESDVR VSMDILSQVS EVYRKIRNTL RFLIANTSDF
NPKEDGIDFA ELRPVDKYML VKFNELVKQI HKAYDNYSFM SVYKSIINFI TNDLSSFYLD
FAKDVVYIEA ANSPERRSMQ TVMYVILKDL VKVLVPILPH TAEETWTYLE HEPENFAYLA
EMPEAAEIPG SEELLGNWQE FLDFRDKILK ALESAREAKL IGKSLEATVT IYPNEVVRTL
LTAIDENVAQ LLIVSNFVVA NGTVSDAPEA AMKFDDLAVL VEHAAGDVCD RCRRTDETVG
HNANENLKML CEHCAHIVEK EFPEVLVEGF ED