Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_2026 |
Symbol | |
ID | 4433755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1920309 |
End bp | 1922111 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639667723 |
Product | ABC-type oligopeptide transport system, periplasmic component |
Protein accession | YP_811620 |
Protein GI | 116512713 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00409621 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TGAATATAAC TTTATTGGCA ACGACTGCAG TTTTAGCAAC TGCACTCTTG AGTGCTTGTG GCTCCAACCA AAGCTCAAGT ACAAGCGCTA CAAAATTAAA AGCCGGAAGT TTTGATGTGG CTTACAAAAA TCCGGACAAG GCTATCAAAG GTGGGAATCT AAAAGTCGCC TATCAAAGTG ACTCCCCAAT GAAAGCCGAA TGGCTGGCTG GACTTGAGAA TGATGCTACT TTTGCTGCGA TGGCTAGTCC AGCAGGTGGA TTAGATGGAA TTTTCTTTAC AAATAGTGCT TTTAAATTTA TCAATGGTGG TCCTGCGAAT ATCAGCCTTG ATGATTCTGC AAAAACAGCA ACAATTACCT TGCGTAAAGA TTTGAAGTGG TCGGATGGCT CGCAAGTTAC GGCTAAAGAC TATGAATTTA CTTATGAAAC AATCGCTAAT CCTGCTTATG GCTCTGACCG TTGGACCGAT TCTTTAGCCA ATATCGTTGG TTTGAGTGAT TATCATACAG GTAAAGCAAA AACAATCTCA GGCATTACTT TCCCAGATGG TGAAAATGGT AAGATTGTCA AGATTCAATT TAAAGAAATG ACACCAGGAA TGACTCAATC AGGGAATGGC TATTTCCTTG AAACAGTGAC TCCTTATCAA TACTTGAAAG ACGTGGCGCC TAAAGACTTG GCTTCAAGTC CAAAAACGAC AACCAAACCA TTAGTCACAG GTCCTTTCAA ACCAGCAAAT GTTGTTGCTG GCGAATCAAT CAAATATGTA CCAAATCCAT ATTATTGGGG CGAAAAACCA AAATTAAACT CTATCACCTA TGAAACAGTT TCAACAAATA AATCAGTTGC TGCTCTCTCA TCTGGTAAAT ATTACTTCAT CAATTCTATG GTCGCTAGTC AGTACAAACA AGTGAAGAAC TTGAAGGGCT ATAAAGTTCT TGGTCAACAA GCACTCTATA TCTCACTGAT GTACTACAAT CTTGGACATT ATGACACAAA AAATTCAATC AATGTTCAAG ACCGTAAGAC ACCATTGCAA GACCAAAGTG TTCGTCAGGC TGTTGCTTAT GCTCGTAATG TTGCAGAGGT TGACAATAAG TTCTCTAACG GACTTGCAAC CCCTGCAAAT GGTTTAATTC CACCTATCTT TAAACAGTTT ACAAGTTCAT CAGTCAAAGG TTATGAAAAA CAAAATCTTG ACAAGGCCAA TAAACTTTTG GATGCAGATG GTTGGAAACT CAATAAGTCT ACAGGCTACC GTGAAAAAGA TGGAAAAGAA TTATCGCTTG TCTATGCAGC GCGTCAAGGA GATGCTAATC AAGAAACCAT CGCTCAAAAC TATATCCAAC AATGGAAGAA GATTGGTGTA AAAGTGAGTC TTTACAATGG TAAATTGATG GAATTTAATT CTTGGGTTGA TCATATGACG ACTCCTCCAG GAGCAAATGA TTGGGATATT ACCGATGGGG CTTGGTCACT TTCGTCAGAA CCATCTCAAC AAGATTTATT CTCAGCAGCA GCCCCTTATA ATATTGGTCA CTTTAACGAC CCACAAATTA CGAATGATTT GAATGATATT GATTCAACTA AGTCAGAAAG TGCAACTTAT CGTAAAGCCG CTTTTGTTAA ATATCAAAAT GATATGAATA AAAAAGCTTA TGTTGTTCCA ACCAACTTTT CATTAAATTA CACACCAGTT AATAAACGTG TGGTCGGAAT GACACTTGAC TATGGGGATA TGAACCTTTG GTCAGAAATT GGAGTCTCTT CTAATAAGAT GGCTACCAAA TAA
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Protein sequence | MKKLNITLLA TTAVLATALL SACGSNQSSS TSATKLKAGS FDVAYKNPDK AIKGGNLKVA YQSDSPMKAE WLAGLENDAT FAAMASPAGG LDGIFFTNSA FKFINGGPAN ISLDDSAKTA TITLRKDLKW SDGSQVTAKD YEFTYETIAN PAYGSDRWTD SLANIVGLSD YHTGKAKTIS GITFPDGENG KIVKIQFKEM TPGMTQSGNG YFLETVTPYQ YLKDVAPKDL ASSPKTTTKP LVTGPFKPAN VVAGESIKYV PNPYYWGEKP KLNSITYETV STNKSVAALS SGKYYFINSM VASQYKQVKN LKGYKVLGQQ ALYISLMYYN LGHYDTKNSI NVQDRKTPLQ DQSVRQAVAY ARNVAEVDNK FSNGLATPAN GLIPPIFKQF TSSSVKGYEK QNLDKANKLL DADGWKLNKS TGYREKDGKE LSLVYAARQG DANQETIAQN YIQQWKKIGV KVSLYNGKLM EFNSWVDHMT TPPGANDWDI TDGAWSLSSE PSQQDLFSAA APYNIGHFND PQITNDLNDI DSTKSESATY RKAAFVKYQN DMNKKAYVVP TNFSLNYTPV NKRVVGMTLD YGDMNLWSEI GVSSNKMATK
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