| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1843 |
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| Symbol | |
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| ID | 4433472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 1735326 |
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| End bp | 1737068 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639667546 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_811443 |
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| Protein GI | 116512536 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGTTT TAGAAAAAAT AGACAGCCCA GCAGATTTAA AAAATATTTC AAATGAAGAA
TTAGAAGAAT TAGCTTCAGA AATTCGAGCA GCAGTCCTTC ACAAAGTATC AAATGTCGGT
GGTCACGTTG GTCCAAATTT GGGCGTGACT GAATTAACAA TTGCCCTTCA CAAAGTTTTC
AATTCACCAG TTGATAAGTT TATTTGGGAT GTTTCCCACC AAACTTATCC ACACAAAATT
TTGACTGGAC GTAAAAATGG ATTTACTGAT GGACATTTCC ATGACATTAC TCCTTATACC
AGTCAAAGAG AGTCTGAGCA CGACTTTTTC ACGGTTGGAC ATACCTCAAC ATCCATTGCT
AATGCCTTAG GTTATGCCAA ACCGCGTGAT TTGACAAAGG ATAAAGGAAA TATTATTGCG
GTAATTGGCG ATGGTTCAAT TTCAGGTGGA CTTGCTATGG AAGCTCTCAA TAACGCTGGA
GATTTCCAAG GAAACCTGAT CATTTTATTC AATGATAATC AAATGTCAAT TGCTGAAAAC
CATGGGGGAC TTTACCGTAA TCTAGCCGAA CTTCGGGAGA CAAATGGTCA AGTTGAAAAT
AACTTCTTTA AAACATTTGG TTTAGATTAT AAATATTTAG AAAATGGAAA TGATATTGAA
TCACTTGTCA ACTTATTTGA AGAAGTAAAA GATATTGACC ATCCAATCGT TCTTCATATT
CATACTGAAA AAGGTCGCGG TTACCAACCA GCCCTTGAAA ATAAGGAAGC TTTCCACTGG
CATATGCCCT TTGATCTTGA AACAGGTCAA TCGAAAGTGA CTGATTCTGG CAAATCTTAT
AGCTCTATCA TGTTAGATTA CATGGACAAA AAAGTTTCAG AAGGTTTGCC ACTTGTAGCT
ATCAATGCAG CAATCCCTGG AATTTTTGGC TTGAAACAAT TTGCAGCTAA ATATCCAGAC
CGTTATATTG ATGCTGGAAT TGCCGAACAA TTTACCATAA CATTTGGTGG GGCAATGGCT
GCAGCTGGTG CTCGTCCAAT CATTTTCCAC AATTCGACCT TTGTGCAACG AGCTTATGAC
CAATTTTGGC ATGATTTAGC AATTAATGAA GAACCAGCGA TTGTCATTGT TAAAGGTGGG
GTTATTTCAG GTTCAGATGA AACGCACCAA GGCTCATCAG CCATGACTTG GATTTCAAAC
ATTCCAAATA TCAAATATCT TGCTCCAACA TCTGAAGAAG AGTTCATTTC AATTCTCGAT
TGGGCACTTG ACCAACATGA AGAACCAGTC GTTATTCAAA TGCCAGAACA TGGATTAGAA
TCACGTCCAA CAGTTCTAAC AGATTTTTCG ACGAGTTCAT ATCAAATGAC AAAAGCTGGT
GAAAAAGTTG CCATTTTGGC TCTTGGTGGA CTTTATTCAC ATGGTGAAAA AGTCGCTAAG
ATTTTAGCTG AAAATGGAGT TAATCCTACA CTTGTTAATC CAATTTTCAT CAATGATTTG
GACCAAGCTT TCCTTGAAAA CTTAGTTGAA AATCATCAAG TGATTGCCAC TATCGAAGAT
GGAATTCTTG ACGGAGGATT TGGTCAAAAA GTAGCCTCAT TCCTCGGGAA ATATGATGTG
AAAGTTTTAA ATTTTGGAGC GAAACGTGAA TTTAATGATT CTGTTCCTGT TGCTGAACTT
TATGACCGCT ACCACCTTAC CCCTGAATTG ATGGTTGCTG ATATTCTGAG CCTTTCAAAA
TAA
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| Protein sequence | MSVLEKIDSP ADLKNISNEE LEELASEIRA AVLHKVSNVG GHVGPNLGVT ELTIALHKVF
NSPVDKFIWD VSHQTYPHKI LTGRKNGFTD GHFHDITPYT SQRESEHDFF TVGHTSTSIA
NALGYAKPRD LTKDKGNIIA VIGDGSISGG LAMEALNNAG DFQGNLIILF NDNQMSIAEN
HGGLYRNLAE LRETNGQVEN NFFKTFGLDY KYLENGNDIE SLVNLFEEVK DIDHPIVLHI
HTEKGRGYQP ALENKEAFHW HMPFDLETGQ SKVTDSGKSY SSIMLDYMDK KVSEGLPLVA
INAAIPGIFG LKQFAAKYPD RYIDAGIAEQ FTITFGGAMA AAGARPIIFH NSTFVQRAYD
QFWHDLAINE EPAIVIVKGG VISGSDETHQ GSSAMTWISN IPNIKYLAPT SEEEFISILD
WALDQHEEPV VIQMPEHGLE SRPTVLTDFS TSSYQMTKAG EKVAILALGG LYSHGEKVAK
ILAENGVNPT LVNPIFINDL DQAFLENLVE NHQVIATIED GILDGGFGQK VASFLGKYDV
KVLNFGAKRE FNDSVPVAEL YDRYHLTPEL MVADILSLSK
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