| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1410 |
|---|
| Symbol | |
|---|
| ID | 4434064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 1322597 |
|---|
| End bp | 1323352 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639667138 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_809348 |
|---|
| Protein GI | 116512132 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTAT TAAAAATAAA CTGGGAAGAC TTAGGCGCAT TTTTACTAAA CAAGGCAATT
ACAATTTTAT TAGTCAGTGT TCTTTTTTTT ATTCTCTACC AAGCAAGTTC TCGGATTGTT
AACCGATTAT TTAAAAATTA TAGTGAGCAA AAATGGACAG ATACTTCAAG AATCCTGACC
CTTTCAAGAC TGACCACAAG CGCTATTCAT TATTTGACCG TTTTCCTTTA TATCTATACT
GTCTTGGGTG TAATGGGAAT TCCTGTTGCA AATGTCCTAG CTGGTGCGGG TATCCTTGGA
GTCGCTCTTG GTTTCGCTGG ACGAGATTTA GTCGCTGATA TCATTAATGG TTTCTTTATT
ATCGTTGAAC ATCAAATCAA TGTTGGGGAT ACGGTTGCCT TTGCCGGTCT TGATATTGAG
GGAGTGGTGA AAACCGTAGG GATTCGTTCC ATTACTGTTA TCGGAGCCGA CGGTGCGACT
ACTTTTATTC CAAACCGAAA TATTGCGGCT CTCAAAAATT ACTCTTATAA AGAAAGAACG
GTCAACCTAG ATGTGCCCGT GACAGACGAA AATATTAGTG AGAAAAAAGC CCAAATTATA
GAAGTCAATG CTATCTACCC TCAAGTTAAA TATCTGGGTA TCATCAACAT TGAAGACAAA
CTTTTTCTAA GAACAAGTCT AACTGCCCCT CTATCTAAAA TTACTCCTTT AAAAATGGAA
ATTTTGGATA AATACTATGA AAAGAATAGG CGATAA
|
|---|
| Protein sequence | MNLLKINWED LGAFLLNKAI TILLVSVLFF ILYQASSRIV NRLFKNYSEQ KWTDTSRILT
LSRLTTSAIH YLTVFLYIYT VLGVMGIPVA NVLAGAGILG VALGFAGRDL VADIINGFFI
IVEHQINVGD TVAFAGLDIE GVVKTVGIRS ITVIGADGAT TFIPNRNIAA LKNYSYKERT
VNLDVPVTDE NISEKKAQII EVNAIYPQVK YLGIINIEDK LFLRTSLTAP LSKITPLKME
ILDKYYEKNR R
|
|---|
| |