Gene LACR_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1348 
Symbol 
ID4432092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand+ 
Start bp1255297 
End bp1256442 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content38% 
IMG OID639667081 
Productarabinose efflux permease 
Protein accessionYP_809291 
Protein GI116512075 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0715454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTA AAAATTTTTC TACCGTCACT GGACTTTTCC TTGGTGTCTT TGTCGTCGGG 
GTTGATAGTT TTATCATCAC CCCATTACTC CCACAAATTG CTCAAGACTT TCATGCAACA 
ATTAGTCAAA CTACCCTTGG TGTCACAACG TATGCCCTTT GTGAAATGAT TGGTGCTCCA 
TTGTTTGGCC CTTTAGGCGA CCGTTTTAGT AAACGTAAAC TTTTAATCAC CGGCATGAGT 
CTTTTTTTAG GGGCTAATCT TCTTTGCGCA ATTGCTACAA ATCTTGCAAC TTTTTACATC 
TATCGTGCAG CTGCGGGACT AGGTGCTGCT CTATTTCTCC CAAATGTCTG GGCATTCATT 
GGTAGTTATT TTAATGGGCA ATTGATGAAT AAAATTATGG GAATTTCAAT GGCGGGTCTT 
TCACTTTCTG TGGCAGTCGG TGTCCCACTT GGATCTTTTC TCTCTCAACT AAGCAATTGG 
CATAGTGCCT TTTGGGCATC GGCCGTTCTT ACAGTATTCT CGCTCATTCT TATAATAGCC 
ATTATCCCAA ATACTACTGC TCAAAATCAA AAAATTAGCT ATTTGGTCAA TTTTAGAAAT 
GTTTTTAAAG CTAAAAATGT GATTCATACA CTTCTTCTAG ATTTCTTTTG GATGTTTGGA 
TTTTACCTAG TCTATACTTT CCTTGGAAGT TTTTTAGCAG AGCATTTCCA TTTTAGTAGT 
GGGAAAGCTG GTCTAGTTTT TCTAATTTAC GGCACCGCAA ATTTTATTGC TGCTTCAACT 
GGTGGTGTGA TTATGAACAA ATTAGGACGA GTAAAGTCAA TTTTATTCAA TGCTTGTGCT 
TCACTTAGCT TTACATTGGC TTTAGGACTG TTTAGCAACA GTATTTTAGG TCTCATTATA 
TTTCTAATTT TGCTCGCCTT TTCTATGGGC TGGGGGGTAA CCGCGATTTC TGCCTATCTT 
GTGACTTTAT CTACTCAAAA TCGCTCAACT TTGATGAGCT TTAATTCATC TGCTCTTTAT 
CTCGGACTGA CTCTCGCGTC TATAGTCGGT GGTCTTATTT ATCAAGGACT TGGTTTTTGG 
ATATTGGGCA TTATTTCAAG TTTCTCCTAT GCCATCGTGA TTTTACTCAT TAAAGGACTC 
CATTAA
 
Protein sequence
MNIKNFSTVT GLFLGVFVVG VDSFIITPLL PQIAQDFHAT ISQTTLGVTT YALCEMIGAP 
LFGPLGDRFS KRKLLITGMS LFLGANLLCA IATNLATFYI YRAAAGLGAA LFLPNVWAFI 
GSYFNGQLMN KIMGISMAGL SLSVAVGVPL GSFLSQLSNW HSAFWASAVL TVFSLILIIA 
IIPNTTAQNQ KISYLVNFRN VFKAKNVIHT LLLDFFWMFG FYLVYTFLGS FLAEHFHFSS 
GKAGLVFLIY GTANFIAAST GGVIMNKLGR VKSILFNACA SLSFTLALGL FSNSILGLII 
FLILLAFSMG WGVTAISAYL VTLSTQNRST LMSFNSSALY LGLTLASIVG GLIYQGLGFW 
ILGIISSFSY AIVILLIKGL H