Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0900 |
Symbol | |
ID | 4433568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 843553 |
End bp | 844269 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639666660 |
Product | uridine phosphorylase |
Protein accession | YP_808871 |
Protein GI | 116511655 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2820] Uridine phosphorylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.768164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAGT TACAAGCACA CATCCAATTG AAGAAAACTG ATGCAGTAGA AGATGCAATT ATTGTAGGTG ATCCAGCGCG GGTAGACCAA GTGGCAAAAT TTTTGACGGA ATTCAGAGAA TTAAAATATA ACCGTGAATT TCGTTCACTT CGTGGCACCT ATAAAAACAA AGAAGTCTTA GTTCTGTCAA CAGGAGTTGG GGCGCCGTCA GCTGCTATTG CCATTGAAGA ACTTCATAAT ATTGGAGTTA AGAGAATTAT CAGAGTAGGC TCTGCTGGAG CTTTGCAGTT AGGGATTGGT TTAGGAAATC CAATTATTGG AGAAGGAGCA GTGCGTGACG ATGGTCTGAC AAAGATGTAT GTTCCAGAAC AATATCCGGC AGTTCCCTCT AGTACTTTAC TAGCAAAAGC AAAAGAAATT GCACCTGAGG CCATTTATGG AATTATTCGT TCGCATGACG GTTTTTATAT GGATAATAAT GAACAGACAC AGGAATATTG GTCAAATTTT GGACTTATTG GTGAGGATAT GGAGTCTGGA GCCTTATTTA CTGTTGGACG TCTGCGAGGA ATAGAAACTT TATCTATTTT AAATAATGTT GTAGCTTATA AAGAAGATTT ACAAGCCGGG GTAAATGATT TAGTTTCAGG GGCTGATAAG GTCATTGAAG GTGAAAAACG AACAATTGAA ATTGCTTTAG AAGTTTTAAA TAAGTAA
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Protein sequence | MEELQAHIQL KKTDAVEDAI IVGDPARVDQ VAKFLTEFRE LKYNREFRSL RGTYKNKEVL VLSTGVGAPS AAIAIEELHN IGVKRIIRVG SAGALQLGIG LGNPIIGEGA VRDDGLTKMY VPEQYPAVPS STLLAKAKEI APEAIYGIIR SHDGFYMDNN EQTQEYWSNF GLIGEDMESG ALFTVGRLRG IETLSILNNV VAYKEDLQAG VNDLVSGADK VIEGEKRTIE IALEVLNK
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