Gene LACR_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0825 
Symbol 
ID4432366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp767621 
End bp768856 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content41% 
IMG OID639666589 
Product3-oxoacyl-[acyl-carrier-protein] synthase II 
Protein accessionYP_808800 
Protein GI116511584 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.863859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATA GAGTTGTAAT CACTGGTTAT GGCGTAGTTA GTGCAATTGG GAATAGCCCA 
GAAGAATTTT GGAACAATCT TAAAGCTGGT AAAACTGGAA TTGGTCCAAT CACTCATTTT
GATGCCGAAG CAACAGGAAT TTCTGTTGCA GCAGAAGTAA AAGAATTTCC ATTTGACAAA
TATTTCCAGA AAAAAGATGC ACGACGCATG GATACTTTCT CACTTTATGC GGTTTATGCA
GCGCTTGATG CGATGGAAAT GTCTGGAATT ACAGAAGAAA ATACTAATTT TGACCGTTTG
GGTTGTATCA TGGCTTCTGG GATTGGTGGA CTTGAACAAT CACAAAAAAA TTCACAAGCG
ATTGTTGCTA AAGGACCTCG TAAAGGCGTA GCACCACTCT ATGTTCCACT TGCTATTGCT
AATATGGCAA CTGGTAATGT TGCTTTACGT ACAGGTGCTC GTGGTGTTTC ACGTGCCGAA
GTTACTGCTT GTGCGGCTGG TGCCAATGCA ATTGGTTCAG CTTTCCGTGA AATCAAACAT
GGTTACGCTG ATGCAATGAT TGCTGGTGGT GCTGAAGCGG CAATTTGTGA ACTTGGAATT
GCTGGATTTG CTAATTTGAC AGCTTTGACT AAAGAAACTG ACCCTGAAAA AGCATGTATT
CCATTTGATA AAAACCGTTC TGGTTTCGTA ATGGGTGAAG GCTCTGGTGT TTTGATTTTG
GAAAGTCTTG AACATGCACA AGCTCGCGGT GCTAATATCT TGGCTGAGAT TGTTGGTTAC
GGAAATACAA ATGATGCTTT CCATATGACA ACTCCTTCAG GAGTTGGTGC TGAAAATGCC
ATTAAATTGG CATTGGAAGA AGCTGGGGCA AGTCCTGCTG ATGTAGATTA TGTCAATGCT
CACGGAACTT CAACACATGC TAATGAAGAA ACTGAAAGCA AAGCGATTCA CAATGTTATC
GGCGATAAAG CTTACGTTTC ATCTACAAAA GCTTTGCATG GACATGCACT TGGTGCAACG
GGTGCAATTG AAGCAGTAGC AACTGTTCAA GCCCTTTTGA ATCAATATGC ACCAGTAAAC
GCTGGAACAA CTGAACTTGA TGAAGGAATG ACAATTAATG TTGTTCTTGG TGAAGGGAAA
CCTGCTGAAA TTAACCTTGC CTTGTCACAA GACTTTGGTT TTGGTGGACA CAATGCTGTA
TTGGCATTCA AGAAATGGGA AAATGCGGCC GAATAA
 
Protein sequence
MTNRVVITGY GVVSAIGNSP EEFWNNLKAG KTGIGPITHF DAEATGISVA AEVKEFPFDK 
YFQKKDARRM DTFSLYAVYA ALDAMEMSGI TEENTNFDRL GCIMASGIGG LEQSQKNSQA
IVAKGPRKGV APLYVPLAIA NMATGNVALR TGARGVSRAE VTACAAGANA IGSAFREIKH
GYADAMIAGG AEAAICELGI AGFANLTALT KETDPEKACI PFDKNRSGFV MGEGSGVLIL
ESLEHAQARG ANILAEIVGY GNTNDAFHMT TPSGVGAENA IKLALEEAGA SPADVDYVNA
HGTSTHANEE TESKAIHNVI GDKAYVSSTK ALHGHALGAT GAIEAVATVQ ALLNQYAPVN
AGTTELDEGM TINVVLGEGK PAEINLALSQ DFGFGGHNAV LAFKKWENAA E