| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0805 |
|---|
| Symbol | |
|---|
| ID | 4433108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 750760 |
|---|
| End bp | 752583 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639666572 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_808783 |
|---|
| Protein GI | 116511567 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA ATTCACTTAA CAAAAAATTT GCCCTTGCTA GCGTTAGTCT TCTGACAATT
AGCACATTAG CAGGATTTGG TGGGCTAGTA AATGTTAATG CTAAAACTAC GGTTGTAACT
GACCAAGTCT CAAATGGTGA AGTTGCTATC TATGCCCAAT CAGCAGCAGG TAATGCAGTC
GCAACGACCA ACAACGATGG TACAAACCCT GATACAGGTG TTGCCAACAA CCAAACAGGT
GGACAAGCAG GAAATACTGG TACAACTAAA AATGACGGGA GCCAACAATC AAGCCTTGAA
GGTTCAACTC CGAGTGTAAT GGCTAATGTG ACATTCTCAG CTACCAAATA CACAGGAACA
GGCGTTCCTA CGGGTGTTGC CGATTCGGCA TTCAATGGTG CAAAAGTCAC AGCGACTTCA
GCTCCTTCAG GACTTGCTGA TTTTACTGGC TTGGCAGATG GTTATTACCT TTTCCATCAA
GTAACAACAG TCAACGGGAT TACAACAGTT GGCGACTTTA TCGTCCAAGT CAATCATAAT
GATAGTCAAG CCGGCATCGT CAACGTCTAT CCAAAATTAG ATATGTCAAG TTCGGCAGGT
TTAGGGACAA GTGCCACAAC AAACGCCGAT GATAACTTTA ATGGTTCAAC ACCAAACCAA
ATTGCTAATC CAAATGCAAC AGGCGATTCT GACCAAACAC TTACAAACTC AGATAATAAT
GCTGGTAATG AAAATCTTGC TAATGGAACA TGGGTAAACA ATAGTGATAA CCAAAATACA
ACGACTGCAG CAGCCGGAAA TACAGTGAGC TGGAATGTGA ACACAGTCTT TGACTCTTCA
CAAACAAATA ATGGAAATGG TACAACTGGT GTAACAGGAA CTTATGTTGT GACCGACCAA
TTACCAAATA ACCTTGTGGA TAGCTCAACA GCTGCAGATG GTACTGTTAT CGTGAATGTC
ACAGACGGTA GCGGAGCGAA AGTCGGGACA TTGACAGCTA CAACAGACTA TACAGTCACA
AATGACGGTA ACGGTAAAAT CATTGTAACT TTGACTCCTG TAGGTCAACA ACATGCGGCG
AGCTTGCTTG GAAATGCCGA TGGTGCATTG AATATCATCA TTCCTTCTAC GGTTAAGACG
GCTGTTGTTG GCTCAGCAAA AGACTCGGCA ACAACAGCCA TCACGAATGC TTATGGGGCT
GACCTTTCAA TGACTGCCGC TGTTCAGTCT ACATTGAATG TTGGTGGAGT TGACATGACG
AAGACAGACG CCTCAACGAG CGATGCCTTG AAAGGTGCAA CATTTACGGT AGTCCGTGCG
GACAATAAAG CTGATGCCCA AGCTTTTGTC ATTGCCAATG CAGCCTACTT TAATAACTCG
GCAGCTGGCG GTTCAGTGGC AAATCCAACT TTGGCTAAGG CAGCCTTTGT CACAGGGGAT
TCCAATGGTA ACGCAAGTAC GACAGCAACC ACACCAGTGA CGTTCACGAC TGGAGAAGAT
GGTATTGCAA CATTTAGCGG TTTGAACTTG GTAGATGACA ATACAGATAC TACTAATACA
AGCAACTACT ACCTTGTCGA AGTTGCCGCA CCAAAAGGTT ATCAACTTCC AGCACCAAAT
ACAGCAGCAA ACTTGACAGG CGCTGTGACA GCTAGTACCG CACCTACTGC GACTGACACA
ACCATTACTA ATAGCAAACC ATTTGCTTTG CCATTTACTG GTGGACAAGG ATTGGCAGGG
ATTATCGCTA TTGCCACAGT CTCAGGAGTT GTAGCCTTTG CCATCAAACG TCGTAAAGAT
AATGAAGAAG AAGTCGTAAA ATAA
|
|---|
| Protein sequence | MKLNSLNKKF ALASVSLLTI STLAGFGGLV NVNAKTTVVT DQVSNGEVAI YAQSAAGNAV
ATTNNDGTNP DTGVANNQTG GQAGNTGTTK NDGSQQSSLE GSTPSVMANV TFSATKYTGT
GVPTGVADSA FNGAKVTATS APSGLADFTG LADGYYLFHQ VTTVNGITTV GDFIVQVNHN
DSQAGIVNVY PKLDMSSSAG LGTSATTNAD DNFNGSTPNQ IANPNATGDS DQTLTNSDNN
AGNENLANGT WVNNSDNQNT TTAAAGNTVS WNVNTVFDSS QTNNGNGTTG VTGTYVVTDQ
LPNNLVDSST AADGTVIVNV TDGSGAKVGT LTATTDYTVT NDGNGKIIVT LTPVGQQHAA
SLLGNADGAL NIIIPSTVKT AVVGSAKDSA TTAITNAYGA DLSMTAAVQS TLNVGGVDMT
KTDASTSDAL KGATFTVVRA DNKADAQAFV IANAAYFNNS AAGGSVANPT LAKAAFVTGD
SNGNASTTAT TPVTFTTGED GIATFSGLNL VDDNTDTTNT SNYYLVEVAA PKGYQLPAPN
TAANLTGAVT ASTAPTATDT TITNSKPFAL PFTGGQGLAG IIAIATVSGV VAFAIKRRKD
NEEEVVK
|
|---|
| |