Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0669 |
Symbol | |
ID | 4433059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 611836 |
End bp | 612771 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639666444 |
Product | integrase-recombinase |
Protein accession | YP_808656 |
Protein GI | 116511440 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCATTTG AAAAATTAGT GAAAGAATAT TTACTAGAAC TAAAACTAGG AAATTATTCT AAAGAAACAA TGGAAACATA TAGACAACAT ATAGATAAGT TCATTGATTT CTACAAGAAA GAAATATCCA ACGAAATGGA TATTTATGCA ATTAACAAAA TACACTACAA ATTATTCATT TCACAACTTT TAGATAACTC TCTGAGAGCT ACATACATCA ATGCAATACT CAAATCAAAC AAAGCTTTCT ACAGTTATCT AATAAGAGAA CAAGTGCTTA AAACAAGTCC TATGGACTCT ATAAAGTTAC TTAAGGAGAC TAAGCAAGCA CTAACAACAT TCAATGATGA TGAGGTAAAG GCAATGTTAA ATGTGTGGAA TTTTAACACT TATTTGAATG CTAGAAACAA ATGTATCATC GCTGTTTTAG CTGATACGGG AATAAGGATT TCAGAACTAA TCAACATTAA AGATTCAGAC CTCACAGACC AGTATATAAG AGTTTTGGGT AAAGGTGACA AGTGGAGAGT CGTACCTATA TCAAATGAGT TAAACTATCT CCTTACGAAA TATAAGAGAC TCAGAGACAA TCATTTCAAT AAGATAAGAA ATAGGAATGG TAAAGTCAGA GAACTTGATT CTGAGCTGTT TTTAGGCAAG ACAGGGCGCT CTATAAAAAC GATTACAAAC ATTGAGGTTA TGATTGCCCA AACAGGCTTA CAAGCCAATG TGAGGGCTTC TGTAAGGTGT AGTCCACATC AATTTAGACA CTACTGGACA TGTAAAAGTT TGGAACTTGG ACAAGACATA TTTACTATCA GCAAGCTGTT AGGACACACC AATTTATCAA CTACACAAAT TTACTTACAA AAGCTGACAA ATGAACAATT AATAAGTAAG GCTGTCAAAT TCAGTCCATT AAAACATTTA AAATAA
|
Protein sequence | MPFEKLVKEY LLELKLGNYS KETMETYRQH IDKFIDFYKK EISNEMDIYA INKIHYKLFI SQLLDNSLRA TYINAILKSN KAFYSYLIRE QVLKTSPMDS IKLLKETKQA LTTFNDDEVK AMLNVWNFNT YLNARNKCII AVLADTGIRI SELINIKDSD LTDQYIRVLG KGDKWRVVPI SNELNYLLTK YKRLRDNHFN KIRNRNGKVR ELDSELFLGK TGRSIKTITN IEVMIAQTGL QANVRASVRC SPHQFRHYWT CKSLELGQDI FTISKLLGHT NLSTTQIYLQ KLTNEQLISK AVKFSPLKHL K
|
| |