| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0472 |
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| Symbol | ligA |
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| ID | 4433014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | + |
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| Start bp | 442374 |
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| End bp | 444434 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639666262 |
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| Product | NAD-dependent DNA ligase LigA |
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| Protein accession | YP_808495 |
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| Protein GI | 116511279 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATCG AGTCAAAAAT TAAAGAGTTT ACGGATCAGC TTAATCAATT TGCCTATGAA
TACTATACTT TAGATGAGCC GTCTGTAGAG GATAGTGAGT ACGACCGCCT ATATCATGAA
TTAGTGAAAT TGGAGCAAGA AAATCCTCAG TTAGTGAGAG CAGATTCTCC CACTCATTGG
ACTGGTGGCG TCATTTTAGA TGGCTTTGTG AAATTTCGAC ATCCTTATAA TCTTTATAGT
TTAGGAGACG TTTTTTCGCG GGAAGAATTA GCCCTTTGGG AAGAGCGTGT CCGCAAAGAG
ATTGTTAATC CAGAATACAT TTGTGAATTA AAAATCGATG GTCTTTCGCT ATCTCTTTAC
TATGAGAATG GCTTACTCGT GACTGCAGCA ACCCGTGGTG ATGGAACAAC TGGTGAAAAT
ATCACAGAAA ATGTAAAACG GATTAAAGAC GTTCCCTTAA AATTAAAAGA AGCCATTGAT
ATTGTGGTGC GGGGAGAGGC TTATTTACCG CGTCAAAATT TTGCTAAATT AAATGCTGAG
CGTGAACTTG CAGGAGCAGC TCCTTTTGCC AATCCTAGAA ATGCAGCAGC AGGGACTTTA
CGTCAGCTAG ATACAAAAAT CGTAGCTAAA CGTGGTTTGG CAACTTTCCT TTATCAAGAA
GCAAGTCCGG CAACCAATGA TACGCAAGAA GAAGTATTAG AATATTTCGA AGAACTTGGA
TTTCAAGTCA ATCCTGAGCG TAAATTTGCT CGAAATTTGG ATGAAATATG GGAATTTATT
GAAGAAGCAA CTCGCTTGCG TGACGAATTG CCTTACGATA TTGATGGTGT GGTTATCAAA
GTCAATAATC TTGCTGAGCA AGAGGAATTA GGTTTTACGG TTAAAGCCCC TCGATGGGCT
ATCGCATATA AATTTCCAGC TGAACAGGCG GAAACGGAAA TTTTATCTGT TGATTGGACG
GTCGGCCGTA CAGGCGTTGT CACACCAACA GCAAATATGA CACCTGTTCT TTTGGCACAA
ACAACGGTTG CAAGGGCAAC TTTGCATAAT GTGGATTATA TCCAAGAAAA AGATATCCGT
AATCATGATA AAGTAATGAT TTACAAGGCG GGAGATATTA TTCCTAAAGT TGGTAAGGTC
CTTCTGGAGA AGCGAAAACC AGCTAAACAT CTTCGTAAAA CTCATCGAGC TAACAAATAT
GTTTGGACAA GATTTGGTAG ACGAAGTGTA GAGAAAGGAT TAGTTTTCTC AAAGCGAGAA
GATAATCGTG TAAAAATTCC AACTCAATGT CCGGAATGTG ATTCAGATTT GATCCATTTT
GAGGATGAGG TGGCATTACG TTGTGTTAAT CCTTTGTGTC CTGCTCAAAT CCGAGAGAAG
TTAATTCATT TTGCTAGTCG TGATGCGATG AATATTGTTG GCTTGGGGCC ATCAGTAATT
TCACAACTTT TTGATAAAAA ATTAGTCACT GATGTTGCTG ATTTATATCA ATTGACCGTT
GAAGATTTAC TGACCCTCGA TAAAGTCAAA GAAACTTTGG CTCAAAAAAT TGTATCTGCA
ATTGCGCAAA GCCGTGAAAA TTCAGCGGAA AAATTACTTT TTGGTTTAGG AATTCGCCAC
GTAGGTGGTA AAGCTGCTAA ATTATTATTA GAACGTTTTG CTAATCTTAG AGCTCTTTCT
CAAGCAAGTG AAGAAGAAAT TTCGGAAATT CCGTCACTTG GTGGGGTAAT TGCTACAGCT
GTGGTTTCAT ATTTTGAAAC AGCTGGAGCC AAAACTTTAC TGGATGAACT AGAGAATGCT
GGTTTGAATT TTGCATATTT AGGCGCAGTT AATGTTGAAG GAATATTATC GGGGAAGACG
GTTGTTTTGA CTGGTAAATT AACGACCTTG AAACGAAAAG AGGCTAAAGA AAAATTGGAA
GCTTTAGGAG CAAATGTTTC GGGCTCTGTT TCTAAGAAGA CTGATTTAGT GGTTGCTGGT
GAAGAAGCTG GAAGTAAATT GACAAAAGCT CAGGATTTAG GAATCGAAAT CTGGTCAGAA
CAAGATTTAC TTGATTTATA A
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| Protein sequence | MNIESKIKEF TDQLNQFAYE YYTLDEPSVE DSEYDRLYHE LVKLEQENPQ LVRADSPTHW
TGGVILDGFV KFRHPYNLYS LGDVFSREEL ALWEERVRKE IVNPEYICEL KIDGLSLSLY
YENGLLVTAA TRGDGTTGEN ITENVKRIKD VPLKLKEAID IVVRGEAYLP RQNFAKLNAE
RELAGAAPFA NPRNAAAGTL RQLDTKIVAK RGLATFLYQE ASPATNDTQE EVLEYFEELG
FQVNPERKFA RNLDEIWEFI EEATRLRDEL PYDIDGVVIK VNNLAEQEEL GFTVKAPRWA
IAYKFPAEQA ETEILSVDWT VGRTGVVTPT ANMTPVLLAQ TTVARATLHN VDYIQEKDIR
NHDKVMIYKA GDIIPKVGKV LLEKRKPAKH LRKTHRANKY VWTRFGRRSV EKGLVFSKRE
DNRVKIPTQC PECDSDLIHF EDEVALRCVN PLCPAQIREK LIHFASRDAM NIVGLGPSVI
SQLFDKKLVT DVADLYQLTV EDLLTLDKVK ETLAQKIVSA IAQSRENSAE KLLFGLGIRH
VGGKAAKLLL ERFANLRALS QASEEEISEI PSLGGVIATA VVSYFETAGA KTLLDELENA
GLNFAYLGAV NVEGILSGKT VVLTGKLTTL KRKEAKEKLE ALGANVSGSV SKKTDLVVAG
EEAGSKLTKA QDLGIEIWSE QDLLDL
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