| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0468 |
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| Symbol | |
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| ID | 4433010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | + |
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| Start bp | 438578 |
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| End bp | 439915 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639666259 |
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| Product | cellobiose-specific PTS system IIC component |
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| Protein accession | YP_808493 |
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| Protein GI | 116511277 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00359] phosphotransferase system, cellobiose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00462633 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAATT TTATTCAAAA CAAAATCATG CCTCCAATGA TGAAATTTTT GAATACCCGT
GCAGTCACGG CAATCAAAAA TGGTATGATT TATCCTATCC CATTTATCAT TATTGGTTCA
GTATTCTTGA TTCTTGGTCA ACTGCCATTC CAGGCAGGAC AAGACTTCAT GAACAAAATC
AAATTGGGCC CACTCTTTTT ACAAATTAAT AATGCTTCAT TTGGTATTAT GGCTTTGCTT
GCCGTGTTCG GTATTGCTTA CGCTTGGGTT CGAGATGCAG GTTATGAAGG AGTACCCGCT
GGTTTAACAG GTGTCATTGT TCACATCTTG TTGCAACCAG ACACAATCCA TCAAGTAACA
AGTGTTACTG ACCCAACTAA AACATCAACA GCATTTCAAG TAGGTGGTGT CATTGACCGA
GCTTGGTTAG GTGGGAAAGG GATGGTTCTC TCAATCATCG TTGGACTCTT AGTAGGTTGG
ATTTACACTG GCTTTATGCG TCGGAACATC ACAATCAAAA TGCCAGAACA AGTTCCAGAA
AATGTTGCCG CATCATTTAC TTCACTTGTA CCTGCAGGAG CAATCATTAC AATGGCTGGT
GTGGTTCATG GAATCACAAC GATTGGCTTC AATACAACTT TCATTGAGTT AGTTTATAAA
TGGATTCAAA CACCATTGCA ACACGTGACT GACGGTCCGG TTGGGGTCTT CGTTATTGCC
TTTATGCCAG TATTTATCTG GTGGTTCGGT GTTCACGGAG CGACAATCAT TGGTGGGATT
ATGGGACCAT TGCTTCAAGC AAACTCTGCT GACAATGCTG CTCTCTACAA AGCAGGACAT
CTTAGCCTGT CAAATGGCGC CCATATCGTT ACTCAATCAT TTATGGACCA ATACTTGACA
GTTACTGGTT CTGGTTTGAC CATTGGTTTA GTTATCTTCC TCTTAGTGAG TGCAAAATCA
GTTCAAGGTA AAACTTTAGG ACGAATGGAA ATTGGACCTG CAGTATTCAA TATCAACGAA
CCTATTCTGT TCGGACTTCC TATCGTTTTG AATCCAATCC TTGCTATTCC ATTTATCTTG
GCTCCGTTGA TTTCAGGAAT TTTGACTTAC TTAGTGATTT ATCTAGGAAT CATTCCACCA
TTTAATGGTG CCTATGTTCC TTGGACAACC CCTGCGGTCT TGTCAGGATA TCTAGTAGGT
GGCTGGCAAG GTATGGTTTG GCAAATTATT ATTCTTGCTT TGACCACAGT TCTCTATTGG
CCATTTGCCA AAGCTTATGA CAATATTCTT CTGAAAGAAG AAGCTGAAAC AGAAGCTGGA
ATTAATGCTG CTGAATAA
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| Protein sequence | MNNFIQNKIM PPMMKFLNTR AVTAIKNGMI YPIPFIIIGS VFLILGQLPF QAGQDFMNKI
KLGPLFLQIN NASFGIMALL AVFGIAYAWV RDAGYEGVPA GLTGVIVHIL LQPDTIHQVT
SVTDPTKTST AFQVGGVIDR AWLGGKGMVL SIIVGLLVGW IYTGFMRRNI TIKMPEQVPE
NVAASFTSLV PAGAIITMAG VVHGITTIGF NTTFIELVYK WIQTPLQHVT DGPVGVFVIA
FMPVFIWWFG VHGATIIGGI MGPLLQANSA DNAALYKAGH LSLSNGAHIV TQSFMDQYLT
VTGSGLTIGL VIFLLVSAKS VQGKTLGRME IGPAVFNINE PILFGLPIVL NPILAIPFIL
APLISGILTY LVIYLGIIPP FNGAYVPWTT PAVLSGYLVG GWQGMVWQII ILALTTVLYW
PFAKAYDNIL LKEEAETEAG INAAE
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