Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0415 |
Symbol | |
ID | 4433350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 386720 |
End bp | 387277 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639666210 |
Product | transposase |
Protein accession | YP_808444 |
Protein GI | 116511228 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2963] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0145159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCAAAT ATTCCATAGA ATTAAAACAA CGCGTTATTC AAGATTATTT ATCTGGCAAG GGAGGCTCTA CCTATCTTGC TAATCTGCAC AACGTAGGTT CATCTAGTCA GGTTAGACGC TGGATTCGCA ATTATCGAGC AGAGGGACTT CCTACAGCTC ACTCCAAAGT CAATAAAAAT TATTCTATGG AGTTGAAAGA AAATGCGGTA CAATGTTATT TAACAACTGA TTTAACGTAT GAAGCTGTGG AAAGAAAATT CGAAATTACT AATTTTACCT TACTTGCAAG CTGGGTTAAT CATTTCAAAA TTTATGGAGA AGTCCCAATA AGCAAAAAGA GAGGATGGCG TAAAAAACTA GAAAGCATTG CATCGTCTAT GACTCAGAAC CCAAATGATT CTCAACGAAT TAAAGAACTT GAACAAGAAT TACGTTATGC GCAAATTGAG GTAGCTTATT TAAAAGGACT TCGGAGATTG GAGAAAAATG CTCTAATGAA CAAAAATCAA GACTCATCTA CAGTCTCCGT AAAACCTTCA AACTCAAAGA AATCTTGA
|
Protein sequence | MVKYSIELKQ RVIQDYLSGK GGSTYLANLH NVGSSSQVRR WIRNYRAEGL PTAHSKVNKN YSMELKENAV QCYLTTDLTY EAVERKFEIT NFTLLASWVN HFKIYGEVPI SKKRGWRKKL ESIASSMTQN PNDSQRIKEL EQELRYAQIE VAYLKGLRRL EKNALMNKNQ DSSTVSVKPS NSKKS
|
| |