| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0407 |
|---|
| Symbol | |
|---|
| ID | 4433342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 378733 |
|---|
| End bp | 379512 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 639666202 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_808436 |
|---|
| Protein GI | 116511220 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3739] Uncharacterized integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0304882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGATT TCTGGGATTT CGGTTTAAAA CAATTTCGGT CAGCAATTTT TGGAATTACG
ATTATTTTGT CATTAATTGT GACCACCTTT ATAAAGATTC CACATCTTGC TCGTTATGAT
ACGTTATTGA TTTGTGTTTT GGTCATTCAA GTTATTTTGT TGGTCAGTAA ATATGAGCGT
GTATATGATT TAATCCCGAT AATGGTTTTT CATATTTTAG GAATGATTTT AGAAATTTTT
AAAGTCAGAC ATGGAAGTTG GTCTTATCCA GATGCTGGTA TATTCAAAAT TATGGATGTT
CCTCTCTATA GTGCCTTTAT GTATTCAGCA ATTGGCTCTT ATATTGTTCG GGCGATAAAA
GAATTTGATT TGGAAGTCAT TCATTGGCCA AAATGGTTTA TTTCAATTGG GATATCTTCA
ATCATTTATT TGAATTTTTT TAGCGGAACC TTTGGTTTTG ACTTTAGAAA TTTATTTTAT
CTCTTTATTT TGATTATTTT CTGGAAAACA AAATTTACTT TTGTCTTAAG GACAAAGCGT
TATCAAATGC CAGCTATTTT AAGCTTCTTT TTAATTGGTC TTTTCATTTA TTTCGCAGAA
AATATTGGCT CTTATTTCAG CGCTTGGATC TATTCTTACC AGCTGAAAGC TTGGAAATTC
GTTGACTTAG GGAAAATTTC TTCTTGGACC TTATTGATTA TTGTTTCAAT TATTATTGTA
ATTGAACTAC AGAGATATTT TTCACAAAAG ATAAAAATAA AAAATATTAT TAATGACTAA
|
|---|
| Protein sequence | MKDFWDFGLK QFRSAIFGIT IILSLIVTTF IKIPHLARYD TLLICVLVIQ VILLVSKYER
VYDLIPIMVF HILGMILEIF KVRHGSWSYP DAGIFKIMDV PLYSAFMYSA IGSYIVRAIK
EFDLEVIHWP KWFISIGISS IIYLNFFSGT FGFDFRNLFY LFILIIFWKT KFTFVLRTKR
YQMPAILSFF LIGLFIYFAE NIGSYFSAWI YSYQLKAWKF VDLGKISSWT LLIIVSIIIV
IELQRYFSQK IKIKNIIND
|
|---|
| |