Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0249 |
Symbol | |
ID | 4433799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 230831 |
End bp | 231505 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639666051 |
Product | HAD superfamily hydrolase |
Protein accession | YP_808289 |
Protein GI | 116511073 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGGAA AATACCCTAT TCTTGTTTTT GATATCAATG AAACCTTGCT AAGTTTCGAA AGTTTAGAAA GTTTTTTCGC TAAATATTTT GATGATAAAA AAGTACTACG TCAGTGGTTT TCTGAACAAA TTTTATACAG TCAGGCTCTA ACCTTGAGTA GGAACTACTA TGATTTTGGA GAACTTGCGA CATCAGTTTT GCAAATGGTT GCTGAACTCC ATAATCATTC TTTAAATGAT AGAGTTTTGT TAGAGTTCAA ACAGTTGCTT GGACAGCTCC TGCCTTATCC AGAGGTAGAA AAAGGACTTG AAATGTTGAA ACAATCAGGT TTTCGTATGA TTGCTTTGAC TAATTCACCT ACGCTTAGCA GTCAGGTTTC GCTTGAACGC TCTGGCCTAC GTAAGTATTT TGAAAATGTC ATCTCTGTGG AAGAAGTTCA GCAGTATAAA CCAGCCCCAG CCACTTATAG ACGAGTTCGT GAGTTAATTG GATTTGAGGA AAAATATTGC ATGATTGCTT GTCATATTTG GGATTTATTA GGCGCTCAAA GTGAAAACTT TGATACCGCT TTTATCAAAC GACAAGGCAA TGCGACTTTG CCCAATCTAT TTCAAGATAA TTTTGTAGCT GATGATTTAC AAGAATTATC AAAATTGCTA ATAAAAAAAT ATTAA
|
Protein sequence | MTGKYPILVF DINETLLSFE SLESFFAKYF DDKKVLRQWF SEQILYSQAL TLSRNYYDFG ELATSVLQMV AELHNHSLND RVLLEFKQLL GQLLPYPEVE KGLEMLKQSG FRMIALTNSP TLSSQVSLER SGLRKYFENV ISVEEVQQYK PAPATYRRVR ELIGFEEKYC MIACHIWDLL GAQSENFDTA FIKRQGNATL PNLFQDNFVA DDLQELSKLL IKKY
|
| |