Gene LACR_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0187 
Symbol 
ID4433877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp172049 
End bp172816 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content35% 
IMG OID639665989 
Producthypothetical protein 
Protein accessionYP_808227 
Protein GI116511011 
COG category[S] Function unknown 
COG ID[COG4470] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAG TAATAGATGA AACTAAATTA AATTATAACA AGTACCCTGG GGAACATGTT 
ATGGCATCAG GAGAAGTCGT TCAAGTTGGA AAACGAACTT TTCACATTGT TCATAATTAT
CGAGAGGCTT TTGACGCGGA AAAATTGGAG CAACGTTTTT CTGATGTTTT AGATAAATAT
GATTATATCG TTGGAGATTG GGGCTTTGAA CAATTACGTT TAAAAGGTTT TTTCTCAACG
AGTCGCAAAA AAATGTTAGC AGATAATAAA ATTGACCATC TTGAAGATTA TATCAATGAG
TATTGTAATT ATGGTTGTGC TTACTTTGTC TTACGTCGAA TTCGGACAAG GGACGAAGCC
TTTGTTTCTG AAAAACTTTT TACCGAAAAA GAATTAAAAC AAGGTTTAGA TAAGCCACGT
CGCAAAAGAA ATCGTAATCG AAATCGAGCC CGTGATGAGC AAACTGTGAA TTCTAAAGAT
GAGAAACGTT CAGAAAACGC CTCAGAAGCT CGGAAAGATT TTAAAATTCG TGATAAATCT
GCTGACAGAA AAGCAAAACC AACTGACAAA AAGATAAATA AGCCGCTCAG CAAGAAATCG
CAAGAAGGAC GAGCTGACAA AGCAGTCAAT AAAAAAGTTA CTTCTTCCAA AGAATCTGAT
AAAAAATTTA CAATGAAAAA ACGAAATCCA CGGAAAAAAG TTGAACAAAC AGAGCCTAAA
AACCAAGGAA ATCAAGGTTT TGTTATTCGT AATCGGAAGA AAGACTAA
 
Protein sequence
MAKVIDETKL NYNKYPGEHV MASGEVVQVG KRTFHIVHNY REAFDAEKLE QRFSDVLDKY 
DYIVGDWGFE QLRLKGFFST SRKKMLADNK IDHLEDYINE YCNYGCAYFV LRRIRTRDEA
FVSEKLFTEK ELKQGLDKPR RKRNRNRNRA RDEQTVNSKD EKRSENASEA RKDFKIRDKS
ADRKAKPTDK KINKPLSKKS QEGRADKAVN KKVTSSKESD KKFTMKKRNP RKKVEQTEPK
NQGNQGFVIR NRKKD