Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0187 |
Symbol | |
ID | 4433877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 172049 |
End bp | 172816 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639665989 |
Product | hypothetical protein |
Protein accession | YP_808227 |
Protein GI | 116511011 |
COG category | [S] Function unknown |
COG ID | [COG4470] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAAAG TAATAGATGA AACTAAATTA AATTATAACA AGTACCCTGG GGAACATGTT ATGGCATCAG GAGAAGTCGT TCAAGTTGGA AAACGAACTT TTCACATTGT TCATAATTAT CGAGAGGCTT TTGACGCGGA AAAATTGGAG CAACGTTTTT CTGATGTTTT AGATAAATAT GATTATATCG TTGGAGATTG GGGCTTTGAA CAATTACGTT TAAAAGGTTT TTTCTCAACG AGTCGCAAAA AAATGTTAGC AGATAATAAA ATTGACCATC TTGAAGATTA TATCAATGAG TATTGTAATT ATGGTTGTGC TTACTTTGTC TTACGTCGAA TTCGGACAAG GGACGAAGCC TTTGTTTCTG AAAAACTTTT TACCGAAAAA GAATTAAAAC AAGGTTTAGA TAAGCCACGT CGCAAAAGAA ATCGTAATCG AAATCGAGCC CGTGATGAGC AAACTGTGAA TTCTAAAGAT GAGAAACGTT CAGAAAACGC CTCAGAAGCT CGGAAAGATT TTAAAATTCG TGATAAATCT GCTGACAGAA AAGCAAAACC AACTGACAAA AAGATAAATA AGCCGCTCAG CAAGAAATCG CAAGAAGGAC GAGCTGACAA AGCAGTCAAT AAAAAAGTTA CTTCTTCCAA AGAATCTGAT AAAAAATTTA CAATGAAAAA ACGAAATCCA CGGAAAAAAG TTGAACAAAC AGAGCCTAAA AACCAAGGAA ATCAAGGTTT TGTTATTCGT AATCGGAAGA AAGACTAA
|
Protein sequence | MAKVIDETKL NYNKYPGEHV MASGEVVQVG KRTFHIVHNY REAFDAEKLE QRFSDVLDKY DYIVGDWGFE QLRLKGFFST SRKKMLADNK IDHLEDYINE YCNYGCAYFV LRRIRTRDEA FVSEKLFTEK ELKQGLDKPR RKRNRNRNRA RDEQTVNSKD EKRSENASEA RKDFKIRDKS ADRKAKPTDK KINKPLSKKS QEGRADKAVN KKVTSSKESD KKFTMKKRNP RKKVEQTEPK NQGNQGFVIR NRKKD
|
| |