Gene Ksed_27010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_27010 
Symbol 
ID8374204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2782908 
End bp2783960 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content64% 
IMG OID644992920 
Productpreprotein translocase subunit YidC 
Protein accessionYP_003150416 
Protein GI256826456 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0706] Preprotein translocase subunit YidC 
TIGRFAM ID[TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAACC TGCTCTACCC CATCGAATGG GCCGTGGCAG CCATCCTCGC CGGCGCCCAC 
TGGGGCGTGA CCGCCCTCGG GCTCCCGGAG GAGTCCGGCT GGACCTGGGT GCTCTCCATC
CTCGCCCTGG TGATCCTCGT TCGCCTGCTG ATGATCCCGC TGGTGGTGAA GCAGATTCAC
AGCAGCCGCA AGATGCAGCT GCTGGCGCCG GAGCTGAAGA AGATCCAGGC GAAGTACAAG
GGCAAGAAGG ACCAGGCGTC CATGCAACGG CAGCAGGCCG AGACCATGGA GCTCTACAAG
AACAACGGGA CCAACCCGTT CGCCTCCTGC CTGCCCATCC TGGTGCAGAT CCCGATCCTG
TTCGGTCTGT TCCGGGTGCT CAACGGGGTG GACGAGATCG CCGCGGGCAC CAAGGACCCC
ATCGGCTTCA TGACCCGGGA CCTGGCGAGC TCCTTCGATG CGGCCACGAT CTTCGGGGCC
GAGCTGTCCG ACTCGTTCCT GCACGACTCC GACCTGACGG GCAAGATCGT CTCGGTCGTC
CTGATCCTGC TCATGACCGT CTTCACCTTC GTGAGCATGA AGATGATGAT GGACAAGAAC
ATGCCGGACT CGGCCAAGGA AGGGCCGATG GCGCAGTCGC AGACCATCAT GCTCTACGCC
CTGCCCGTGA TCCTGGCCGT CACCGGTGTG AACTTCCCGA TCGGTGTGCT CGTCTACTGG
ACCTTCACCA ACCTGTGGTC CTACTTCCAG CAGCTCTACG TCATCCGCAA CCTGCCCACG
CCGAACACCG AGGCCGAGCG CCGCATGCAC GCACGCCAGA TCGCCAAGGG CAAGGAGCCG
AAGCGACTCA CGCTGGCCCC GGCTGGTGGG GGCAAGGACT CCGGGTCGAC CGCCCTGGGC
GACGATGACG CGAAGAGCTC CTCGGAGCCG GTGCTGAACT CGACGTCGAA GCAGCCCGAC
CGCCTCGCAC AGGGCGGCAG CGGTGGACAG CGCGCCCAAC CAGTTCGTCG CAAGAAGAGC
AACAAGAGCA AGAAGAAGCG GAAGAAGAAC TGA
 
Protein sequence
MPNLLYPIEW AVAAILAGAH WGVTALGLPE ESGWTWVLSI LALVILVRLL MIPLVVKQIH 
SSRKMQLLAP ELKKIQAKYK GKKDQASMQR QQAETMELYK NNGTNPFASC LPILVQIPIL
FGLFRVLNGV DEIAAGTKDP IGFMTRDLAS SFDAATIFGA ELSDSFLHDS DLTGKIVSVV
LILLMTVFTF VSMKMMMDKN MPDSAKEGPM AQSQTIMLYA LPVILAVTGV NFPIGVLVYW
TFTNLWSYFQ QLYVIRNLPT PNTEAERRMH ARQIAKGKEP KRLTLAPAGG GKDSGSTALG
DDDAKSSSEP VLNSTSKQPD RLAQGGSGGQ RAQPVRRKKS NKSKKKRKKN