Gene Ksed_26290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_26290 
Symbol 
ID8374132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2696470 
End bp2698170 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content74% 
IMG OID644992849 
ProductATPase component of various ABC-type transport systems with duplicated ATPase domain 
Protein accessionYP_003150345 
Protein GI256826385 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.152268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGACA TGGCCGCCGA CACCCCCGCA CCGCCTGCCG CAGGCCCCCG CCTGGTGGCG 
CGCGACCTGT CCGTCGGCAC CCGCCACCGC ACCCTGGTCT CCGGGGTGGA CCTCACCCTC
GATGCGGGCG AGCGCGTCGG TCTGATCGGT GAGTCCGGGT CGGGCAAGTC GCTCACGGCC
CTGGCGATCA TGGGGCTGCT GCCGGACAAC CTGCACGCCA CCGGCAGCAT CGAGCTCACG
CCCGAGGGGG GCGCCACCAC GCAGGTGGTC GGCGCCAGCG ACCGTGCGAT GTCGCGCATC
CGTGGCCTGG ACCTCTCGAT GGTCTTCCAG GAGCCCATGA GCGCGCTCAA TCCCACGATG
CGCGTCGGCG ACCAGGTGGC CGAGGTGATG GAGATCCACG GCACCGCCCG CGGGGACGCC
GCCGCCCGCC GAGCCGTGGA GCTGCTCGAG AGCGTGGGCA TCACCGATGC CGAGGGCGTC
GCCCGCGCCC ACCCGCACCA GCTCTCCGGC GGGCAGCGGC AGCGGGTGGT CATCGCCATC
GCGCTGGCCA ACGACCCCGA CGTGCTGATC TGCGACGAGC CGACCACCGC CCTGGACGTG
ACCGTGCAGG CCACCGTGCT GCGCCAGGTG CTCGACGGCG CCCGCGAGCA CGACGCGGCG
CTGTTGTTCA TCACCCACGA CCTCGCCGTG GTCTCGCAGG TGTGTGAGCG CGTGGTGGTG
CTCAAGGACG GGCAGGTGGT GGAGCGCGGG ACGGTGGCCG AGGTCTTCGG CGCCCCCCAG
CACCCGTACA CGCAGGCCCT GGTGGCGGCC TCGCGCCTGA AGCCCCGCGC GGGCACCGGT
ACCACGGCGC TCGACCTCGC CGGCTCGCCC GGCATCGATG CGGTGGCCGA GCCCGGCGAG
AGCACCCCGC CGGAGGCTCC CGCCGTCGCG GTGGAGGACG TGCGGCAGGT CTACACCCGC
CCCCGCCGGA GCCTGTTCTC CGCCCGGCCG CAGGTCGTGG CGCTCGATGG GGTGAGCCTC
ACCGTCGAGC CCGGCGAACG CTTCGGCATC GTCGGGGAGT CGGGGTCGGG CAAGTCGACG
CTGCTGCGGC TGGTCGCGGG GTTGGAGTCC CCCGTATCGG GGCGGGTCGA GGTGCTCGGG
CGGCAGGTCT CGGGCGTGCC GGAGCGCCGG CTCGGGTGGC TGCGGGAGGG CGTGCAGATG
GTCTTCCAGG ACCCGCGCGA CTCGCTGGAC CCGCGGATGA CCGTGCGCGA CGTGGTGGCC
GAGCCGCTCG TGGCGCAGGG GTGGTCCGGG GGCGACCGGG ACGACCGCGT GGCCGAGCTG
CTGCGCCGGG TGGGTCTGGA GCCGTCGATG ATGCGGCGCC ACCCGCACCA GTTCAGCGGC
GGGCAGCGGC AGCGCATCAG CATCGCACGG GCCCTGGCGC CCTCGCCGCG GGTGCTGCTG
GCCGACGAGC CGGTCTCCGC CCTGGATGTG AGCGTGCGCG GCCAGGTGCT GGACCTCATC
GGGGAGCTGG TGGACGAGCT GGGGCTGACG CTGGTCTTCG TGAGCCACGA CCTCTCGGTG
GTCCGGCACG TGTGTGAGCG GGTGGCCGTG ATGCGGCGGG GTGAGCTGGT GGAGGTGGCG
CCCACCGAGC AGCTGTGGTC CGCGCCGGGG ACGGACTACA CCCGCTCCCT CATCGAGGCG
ATCCCGCGCA TGGCGGTCTG A
 
Protein sequence
MSDMAADTPA PPAAGPRLVA RDLSVGTRHR TLVSGVDLTL DAGERVGLIG ESGSGKSLTA 
LAIMGLLPDN LHATGSIELT PEGGATTQVV GASDRAMSRI RGLDLSMVFQ EPMSALNPTM
RVGDQVAEVM EIHGTARGDA AARRAVELLE SVGITDAEGV ARAHPHQLSG GQRQRVVIAI
ALANDPDVLI CDEPTTALDV TVQATVLRQV LDGAREHDAA LLFITHDLAV VSQVCERVVV
LKDGQVVERG TVAEVFGAPQ HPYTQALVAA SRLKPRAGTG TTALDLAGSP GIDAVAEPGE
STPPEAPAVA VEDVRQVYTR PRRSLFSARP QVVALDGVSL TVEPGERFGI VGESGSGKST
LLRLVAGLES PVSGRVEVLG RQVSGVPERR LGWLREGVQM VFQDPRDSLD PRMTVRDVVA
EPLVAQGWSG GDRDDRVAEL LRRVGLEPSM MRRHPHQFSG GQRQRISIAR ALAPSPRVLL
ADEPVSALDV SVRGQVLDLI GELVDELGLT LVFVSHDLSV VRHVCERVAV MRRGELVEVA
PTEQLWSAPG TDYTRSLIEA IPRMAV