Gene Ksed_24580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_24580 
Symbol 
ID8373961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2537919 
End bp2538854 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content78% 
IMG OID644992684 
ProductA/G-specific DNA glycosylase 
Protein accessionYP_003150188 
Protein GI256826228 
COG category[L] Replication, recombination and repair 
COG ID[COG1194] A/G-specific DNA glycosylase 
TIGRFAM ID[TIGR01084] A/G-specific adenine glycosylase 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCAC GCACCAGGGG GCCGGCCCCG CGCCGCGCCC CGGACGACGC CGCCCTCCGC 
CGGGGAGCCG CGCTGGCCGC ACCGCTGGCC CACTGGTACG CCCGCCACGC CCGGGACCTG
CCGTGGCGCC ACGACGACTG CTCCCCGTGG GGCGTGCTCG TCTCCGAGGT GATGCTGCAG
CAGACCCCGG TGGTGCGGGT GCTGCCCGTC TGGACCACGT GGATGGAGCG GTGGCCCACC
CCGGCGGACC TCGCGGACGC CGGCCCCGGC GCGGCCGTGC GGGCCTGGGG CCGCCTCGGC
TACCCCCGAC GAGCCCTGCG CCTGGTGGAC GCCGCGACCG CGATCCGGGA CCACCACGGC
GGGGAGGTGC CCTCCGACGA GGAGGCCCTG CGGAGCCTCC CCGGCATCGG GGAGTACACC
GCCGCGGCCG TGGCGGCCTT CGCCTTCGGA CAGCGGGCCG TGGTGGTGGA CACCAACATC
CGCCGCGTGC AGGCGCGCGC GGTCTCGGGG CGTGCCCTGC CCGCCCCCAG CTACACCGCC
GCCGAACGCG CCCTGGCCAC CGCCCTGCTA CCGGCGGGCG CCGCGGAGAG CGTGCGCTGG
AACATCTCCA CGATGGAGCT CGGCGCCCTG GTCTGCACCG CCCGGAACCC CGCGTGTGGC
CAGTGCCCGC TGGTCGACCC CTGCGCTTGG GTGGCCGCCG GGTCCCCGCA GGACGACGGG
CCACCGCGGC GCGGCCAGGC CTGGGCGGGC ACCGACCGGC AGGCGCGCGG CCGCATCGTG
CAGGCCCTCC GCGATGCGGA CGGCCCCCTC TCCCGCGAGC AGGTGCTCAC CGCATCGGGG
GCCACCGAGA TGCAGGCGGA ACGCTGCCTG AGCGGTCTGC TCGAGGACGG GCTGGCCGAG
GGGGACGACC ACACCGGGTA CACGCTGCCG ACCTGA
 
Protein sequence
MAARTRGPAP RRAPDDAALR RGAALAAPLA HWYARHARDL PWRHDDCSPW GVLVSEVMLQ 
QTPVVRVLPV WTTWMERWPT PADLADAGPG AAVRAWGRLG YPRRALRLVD AATAIRDHHG
GEVPSDEEAL RSLPGIGEYT AAAVAAFAFG QRAVVVDTNI RRVQARAVSG RALPAPSYTA
AERALATALL PAGAAESVRW NISTMELGAL VCTARNPACG QCPLVDPCAW VAAGSPQDDG
PPRRGQAWAG TDRQARGRIV QALRDADGPL SREQVLTASG ATEMQAERCL SGLLEDGLAE
GDDHTGYTLP T