Gene Ksed_24320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_24320 
Symbol 
ID8373935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2512626 
End bp2513519 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content69% 
IMG OID644992658 
Productcytochrome c-type biogenesis protein CcsB 
Protein accessionYP_003150162 
Protein GI256826202 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID[TIGR03144] cytochrome c-type biogenesis protein CcsB 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.909816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTGC TGGCAACCGC GCCGGTGGTG CTGCCGATGG CTGTGGACGA GCCGATGGCC 
CGCACCTCGG ACATCGCGCT GGTGGTGACG ATGAGCATCC TGGCGCTCTC GATGCTCGCC
TACACCGGGT ACCTCGCAGC GGCGGACGGT CGACGCTTCG GCACCGCGGG GCAGTTCCTC
GCCTGGGCCG GGACGGCGGC GCTGATCGTC ACGATCGCCA CGCGCGGGCT CTCGGTGAGC
CGCGCCCCGC TGGGCAACAT GTACGAGTTC GCCCTGGCGG CGGCCGGCTT CGCGATGCTG
GGCTTCAGCC TGTGGAGCGC CGTGCGTGAC ACCCGGTGGC TGGGGCTGTT CGTGGTGGGC
CCGGTGCTGC TGGTGCTGGG AGCGGCCGCC ACGGCCTGGT GGACCGAGGC CTCCCAGCTG
ATGCCCTCGC TGCAGAGCTC GTGGCTGGTC ATCCACGTGA CGGTGGCGAC CTTGTCCATC
GGCGTGTTCA TCCTGGGCTT CGCCCTGGCG GTGCTGTTCC TGCTCAAGCG GCGGCGGGAG
GAGTCCGGCG GCAGCTGGGG GCCGGCCTTC CTGGACCGCG TGCCGGGCGT TGACCGGCTG
GACAAGTTCA CCTACTCGGC GCACATCATC GGCTTCCCGC TGTGGACGTT CACGCTGGTG
GCCGGCGCCA TCTGGGCCGA GCGTTCGTGG GGCCGTTACT GGGGGTGGGA CCCCAAGGAG
GTCTGGACCT TCGTGATCTG GGTGGTCTAC GCCGCCTACC TGCACGCCCG CGCCACGGCC
GGGTGGACGC GCCACGCGGT GTGGTTGGCG ATCGCCGGAT TCGTGTGCAT CATCATCAAC
TACGCCATCG TGAACGTGTA CTTCGTTGGC TACCACTCGT ACTCGGGGAT GTGA
 
Protein sequence
MNVLATAPVV LPMAVDEPMA RTSDIALVVT MSILALSMLA YTGYLAAADG RRFGTAGQFL 
AWAGTAALIV TIATRGLSVS RAPLGNMYEF ALAAAGFAML GFSLWSAVRD TRWLGLFVVG
PVLLVLGAAA TAWWTEASQL MPSLQSSWLV IHVTVATLSI GVFILGFALA VLFLLKRRRE
ESGGSWGPAF LDRVPGVDRL DKFTYSAHII GFPLWTFTLV AGAIWAERSW GRYWGWDPKE
VWTFVIWVVY AAYLHARATA GWTRHAVWLA IAGFVCIIIN YAIVNVYFVG YHSYSGM