Gene Ksed_24030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_24030 
Symbol 
ID8373906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2486282 
End bp2487007 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content71% 
IMG OID644992631 
ProductMn-dependent transcriptional regulator 
Protein accessionYP_003150135 
Protein GI256826175 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGACC TCATCGACAC CACCGAGATG TACCTCAAGA CCATCTACGA GCTCGACGAA 
GAGGGCATCC CGGCGCTGCG CGCGCGCATC GCCGAGCGAC TGGGCCACTC GGGCCCGACG
GTCTCGCAGA CGATCGCCCG CATGGAGCGC GACGGGCTGG TCACCCTCGG CGAGGACCGC
CACCTCACGC TGACCGGCGA GGGGCGCCAG CTGGCCACCC GCATCGAGCG CAAGCACCGG
CTGGCCGAGC GCCTGCTGGT CGACGTCATC GGCCTGGAGT GGGAGTACGT CCACGACGAG
GCCTGCCGCT GGGAGCACGT CATGAGCGAC CGGGTGGAGC GCAAGATCTT GGCCCTGCTG
GAGAACTCCG AGGAATCCCC CTACGGCAAC CCGATCCCCG GGCTCGAGGA GCTCGGCGGG
GTGCAGGGCA AGACCTTCCG CGACGGCGTG GAGTCCCTCG TGGACGTCGT CCGCGACGGG
CACGACGCCG TGTTCGTCCG CCGCATCGGC GAGCCCGTGC AGGTCGACGG GGAGGCGCTC
GCGCTGCTCA CCGAGGCCGG CGTGCTGCCC GGCGAGCGCA TCGAGGTGAG CTCCCAGTCC
GACGACCGCA TCGTCGCCCG GGGCCTGGGC GAGAACGCCT CCGGCGGGGT CTCCCTGCCG
CGCGAGATCG CCTCCCACGT CTTCGTGAGC CGCGTTGACG TCCGAAGTCC GCAAGACACC
AAGTAA
 
Protein sequence
MSDLIDTTEM YLKTIYELDE EGIPALRARI AERLGHSGPT VSQTIARMER DGLVTLGEDR 
HLTLTGEGRQ LATRIERKHR LAERLLVDVI GLEWEYVHDE ACRWEHVMSD RVERKILALL
ENSEESPYGN PIPGLEELGG VQGKTFRDGV ESLVDVVRDG HDAVFVRRIG EPVQVDGEAL
ALLTEAGVLP GERIEVSSQS DDRIVARGLG ENASGGVSLP REIASHVFVS RVDVRSPQDT
K