Gene Ksed_23670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23670 
Symbol 
ID8373870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2453428 
End bp2454642 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content67% 
IMG OID644992597 
Productsignal transduction histidine kinase 
Protein accessionYP_003150103 
Protein GI256826143 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCGT TCACCGCCCC CGCGACCCGT GAACGGCTCC GTACTGTCTG GCAGGAGCGC 
CCCTGGATCG CGGACATCGT CCTAGCGGCG CTCGTCGGGG TGCTCGGCGC GATCAGCCGG
CCGACGCTGT CGTTCGCCAC GCCTGAGCAG GTCGCCTACA GCTTCGTCGT GTTCGGCTGC
TCGATCGCTC TGATCTTCCG CCGCCTGCGC CCGCGGCTCG CCCTCGCTGT CGTCGGGGTT
CTGCTCTTCG TGCATCTCGT AGTGGTGCAG GAGCTGACGG TGTTCGCCGG TGCGGTGTGT
CTGATCGGCG CGTACACCAC GCAGACGCGA CTGCTCCCGC CGTGGCGGTG GGGATACGCC
GCTGTCATCT ACGTGGGTGC CGGCGTGGCG GTACTCACCG TGCCGACTCC CGCTCCGGGT
ACCGACTGGA AGGTCAGGCT GGTGATCTCC GCTGCCGCAG TGGCTCTGAT CACGGTCGCC
GTCCTGGCTG GCATCGTCCG GCGGAACCGG AAAGCACGCT ACGAGGACGC GCTCGAACGT
GCCGCTGCCC TCGAAGCCCG GCAAGCGGTG GAGCGGCGGC TCGCTGCTGT CGAGGAGCGC
ACCCGCATCG CTCGCGAGAT GCACGACGTG CTCGGCCACT CGCTGAACAC CATCGCGATC
CAGGCCGAAG GCGTCCGCTA CGTCGTCCGT ACCGACCCAC AGCGCACCGA TCAAGTCCTT
GCCGACATCG GGCGCTTGAG CCGCACCGCT GTAGATGACG TGCGCGATCT CATCAGCGTG
CTCGCCACCG ACGACGAGGG TAAGGCTCCC GTGCGACCGA CGCCCACTCT TCGCGATGTT
CGCGAGCTCA TCAGCGACTT GCAGTACACG AGAGCGGCGA TCCGGCTGCA TGTCGAAGGC
GACCTCACCT CTATCCCCGA TCAGGTCGGA CTGGCCGGGT ACCGGATCGT CCAGGAGAGC
CTGACGAACG CTTTGAAGTA TGCCGACGGT GCAGCAGTGA GTGTCCGTAT CCTCGTACAC
GATAATTCGG TCGAGCTGAC CGTGCTGAAC GCCGCATCCG GTGAACGGCG CACCAGACCG
CGCGGCGTCT CGCACCACGG GATCATCGGA ATGCAGGAGC GTGCACGCGC CCTCGGGGGC
ACGCTCACCG CCGGCCCCGA TCCGAACACC GGCGGATGGG TCGTGGCCGC GAGCCTGCCG
TGGAGGCAGT CATGA
 
Protein sequence
MEPFTAPATR ERLRTVWQER PWIADIVLAA LVGVLGAISR PTLSFATPEQ VAYSFVVFGC 
SIALIFRRLR PRLALAVVGV LLFVHLVVVQ ELTVFAGAVC LIGAYTTQTR LLPPWRWGYA
AVIYVGAGVA VLTVPTPAPG TDWKVRLVIS AAAVALITVA VLAGIVRRNR KARYEDALER
AAALEARQAV ERRLAAVEER TRIAREMHDV LGHSLNTIAI QAEGVRYVVR TDPQRTDQVL
ADIGRLSRTA VDDVRDLISV LATDDEGKAP VRPTPTLRDV RELISDLQYT RAAIRLHVEG
DLTSIPDQVG LAGYRIVQES LTNALKYADG AAVSVRILVH DNSVELTVLN AASGERRTRP
RGVSHHGIIG MQERARALGG TLTAGPDPNT GGWVVAASLP WRQS