Gene Ksed_23340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23340 
Symbol 
ID8373837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2423086 
End bp2423781 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content66% 
IMG OID644992568 
Productsuccinate dehydrogenase/fumarate reductase cytochrome b subunit, b558 family 
Protein accessionYP_003150074 
Protein GI256826114 
COG category 
COG ID 
TIGRFAM ID[TIGR02046] succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACCTG ACAACGCGGC TCCGACAAAG CGGTCGGCCA CCACCACGAC GATCTGGAAC 
AAGATCCTCA TGGCGGTCAC CGGCCTGATC TTCATCGTCT TCGTGCTTGG GCACATGCTG
GGGAACCTCA AGATCCTCCA GTCCCACGAG GCGTTCGACA CCTACGCGCA CCAACTGCGC
GTCCTGGGGG AGCCGATCCT CCCCTACGAG GGCGCCCTGT GGATCATCCG CATCGTCCTG
GTGTTGGCAG TCCTCGCCCA CGCGCTGATC GCGCTCAAGC TGTGGGGCCG CGCCCGGAAG
GCACGGGGCA CGCGCTACGC GGTGCACAAG GCCGTGACCT CCACCTGGGC CTCGCGGACG
ATGCGGTGGG GCGGCATCGC GCTGCTGCTG TTCGTGATCT TCCACATCCT GCACTTCACG
ACCAAGCACA TCCACCCGCA GGGCCAGCTG GCCAGCCCGG CGGCCAACTA CGTGGAGAGC
TTCGAGATCT GGTGGGTGCT GCTGATCTAC GTGGTCGCGA TGATCGCGCT GGGGCTGCAC
ATCTTCCACG GCACCTTCTC CGCCGCGCAG ACCCTCGGCT TCACGACCAC CAAGAACAGC
CCGGCGCTGC GGACCACGGG CGCGGTGATC GCCGCCCTCG TGGTGATCGG CTTCCTCGTG
CCGCCGTTCG CGGTGTTCTT CGACCTCGTC AACTGA
 
Protein sequence
MAPDNAAPTK RSATTTTIWN KILMAVTGLI FIVFVLGHML GNLKILQSHE AFDTYAHQLR 
VLGEPILPYE GALWIIRIVL VLAVLAHALI ALKLWGRARK ARGTRYAVHK AVTSTWASRT
MRWGGIALLL FVIFHILHFT TKHIHPQGQL ASPAANYVES FEIWWVLLIY VVAMIALGLH
IFHGTFSAAQ TLGFTTTKNS PALRTTGAVI AALVVIGFLV PPFAVFFDLV N