| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_23330 |
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| Symbol | sdhA |
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| ID | 8373836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | - |
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| Start bp | 2420855 |
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| End bp | 2423062 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644992567 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_003150073 |
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| Protein GI | 256826113 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAC TCTTTGGAGA CAACGCCCCC TGGAAGCGCA AGCGCGACGA CCGCGCTGTG
GACGCCGACG GGGACCAGCA GCGCGGTACC GCCCAGAGCG AGGCGCAGAC CAGCTCGCAG
GGCGCCTCGG ACGTGAGCGG TCCCGCCAAC GCGTCCGTGG ACGAGTCCGA GGTCGGCGCC
GCGCGCCCGG CCGACGACCG TGCGGTGAAC AAGTCCGGTG AGCACACGAA CGACCCGTGG
ACCCTGGGCG ACCCGATCGC GGACACGAAG GCGCCCAAGG GCCCCATCGA GACCCGGTGG
CAGCGTCGCC AGTTCGAGGC CACGCTGGTG AACCCCGCCA ACCGCCGCAA GATCGACGTC
ATCATCGTCG GCACGGGCCT GGCCGGTGCC GCCGCGGGCG CGACGCTCGG CGAGGCCGGG
TACAACGTGA AGTCCTTCTG CTACCAGGAC TCGCCGCGCC GTGCGCACTC GATCGCCGCG
CAGGGTGGCA TCAACGCCGC CAAGAACTAC AAGAACGACA ACGACTCGGT CTTCCGCCTG
TTCTACGACA CGGTCAAGGG CGGCGACTAC CGCTCCCGCG AGTCGAACGT GTACCGCCTC
GCCGAGGTGA GCGCGAACAT CATCGACCAG TGCGTGGCCC AGGGTGTGCC CTTCGCCCGC
GAGTACGGCG GCCTGCTGGA CAACCGCTCC TTCGGTGGCG TGCAGGTGCA GCGCACCTTC
TACGCCCGTG GCCAGACGGG CCAGCAGCTG CTGATCGGCG CCTACCAGGC CCTGGAGCGC
CAGATCGGCG CCGGCACCGT GGAGATGTTC AACGCCCACG AGATGCTGGA GCTCGTCGTC
ATCGACGGCA AGGCGCGCGG CATCATCGCC CGCAACCTGC GCACCGGTGA GATCGAGACC
CACATGGCCG ATGCGGTCGT CCTCGCCACC GGCGGGTACG GCAACGTCTT CTTCCTCTCC
ACGAACGCGA TGGGGTCGAA CGTCACCGCC GCGTGGCGTG CGCACCGCAA GGGCGCCTAC
TTCGGCAACC CCTGCTACAC GCAGATCCAC CCCACCTGCA TCCCGCAGTC CGGCGAGCAC
CAGTCCAAGC TCACGCTGAT GAGCGAGTCG TTGCGCAACG ACGGCCGCAT CTGGGTGCCG
AAGGACGCGG CGGACTGCGA CAAGGACCCG CGCGACATCC CGGAGGAGGC GCGCGACTAC
TACCTGGAGC GCATCTACCC CTCGTTCGGA AACCTCGTGC CGCGTGACAT CGCGAGCCGC
CAGGCCAAGA ACATGTGCGA CGACGGCCGT GGCGTGGGGC CGGCCATCGC CGAGACCTCG
CCCGATGGCG AGGAGCGCCA GGTGCGCCGC GGCGTCTACC TGGACTTTGC CAGCGCGATC
GAGCGCATGG GCCAGGAGGC CGTGGCCGCG AAGTACGGCA ACCTCTTCGA CATGTACGAG
CGCATCACCG GGGAGAACCC CTACGAGGTG CCGATGCGCA TCTACCCGGC CGTCCACTAC
ACGATGGGTG GCCTCTGGGT GGACTACGAC CTGGAGTCCA CCATCCCGGG TCTGTTCGTG
GCCGGTGAGG CGAACTTCTC CGACCACGGC GGCAACCGCC TCGGCGCCTC GGCGCTCATG
CAGGGTCTGG CCGACGGCTA CTTCGTGCTG CCGAACGTCA TCAACGACTA TCTGGCCAAG
CAGGGGCACA GCGAGATCGA CGCGAACCAC CCCGAGGCCG TCGCGGCACG CGAGGAGGTC
GAGGCGCGGG TGGAGAAGAT GCTCAGCATC AACGGCACCC GTACCGTGGA CTCCATCCAC
CGCGAGCTCG GCAACATCAT GTGGGAGTAC TGCGGCATGG AGCGGACCGA TGAGGGTCTG
CGCATCGCGA TCGAGAAGAT CCGCGAGCTG CAGAACGAGT TCTGGACCAA CGTGAAGGTG
CCCGGTGCGG CGGCCACGTT GAACCAGTCC TTGGAGAAGG CCGGCCGCGT GGCCGACTTT
CTGGAGCTCG GTGAGCTCAT GTGCATCGAT GCGTTGCAGC GTACGGAGTC GGCCGGTGGC
CACTTCCGGG CGGAGTCCCA GACCGAGGAC GGTGAGGCCC TGCGTGATGA CGAGGACTTC
GCCTACGTGG CGGCCTGGGA GTACACCGGG GCGGGCAACT CCCCGATCCT GCACAAGGAA
GAGCTCGAGT ACGAATTCGT CGAGATGAAG CAGCGGAGCT ACAAGTGA
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| Protein sequence | MATLFGDNAP WKRKRDDRAV DADGDQQRGT AQSEAQTSSQ GASDVSGPAN ASVDESEVGA
ARPADDRAVN KSGEHTNDPW TLGDPIADTK APKGPIETRW QRRQFEATLV NPANRRKIDV
IIVGTGLAGA AAGATLGEAG YNVKSFCYQD SPRRAHSIAA QGGINAAKNY KNDNDSVFRL
FYDTVKGGDY RSRESNVYRL AEVSANIIDQ CVAQGVPFAR EYGGLLDNRS FGGVQVQRTF
YARGQTGQQL LIGAYQALER QIGAGTVEMF NAHEMLELVV IDGKARGIIA RNLRTGEIET
HMADAVVLAT GGYGNVFFLS TNAMGSNVTA AWRAHRKGAY FGNPCYTQIH PTCIPQSGEH
QSKLTLMSES LRNDGRIWVP KDAADCDKDP RDIPEEARDY YLERIYPSFG NLVPRDIASR
QAKNMCDDGR GVGPAIAETS PDGEERQVRR GVYLDFASAI ERMGQEAVAA KYGNLFDMYE
RITGENPYEV PMRIYPAVHY TMGGLWVDYD LESTIPGLFV AGEANFSDHG GNRLGASALM
QGLADGYFVL PNVINDYLAK QGHSEIDANH PEAVAAREEV EARVEKMLSI NGTRTVDSIH
RELGNIMWEY CGMERTDEGL RIAIEKIREL QNEFWTNVKV PGAAATLNQS LEKAGRVADF
LELGELMCID ALQRTESAGG HFRAESQTED GEALRDDEDF AYVAAWEYTG AGNSPILHKE
ELEYEFVEMK QRSYK
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