Gene Ksed_23100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23100 
Symbol 
ID8373813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2394060 
End bp2394560 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content74% 
IMG OID644992544 
Productpredicted membrane protein 
Protein accessionYP_003150050 
Protein GI256826090 
COG category[S] Function unknown 
COG ID[COG5395] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.121843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.492875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCA CCTGGACCAC CCTGCTCGTC ACCCACACCC TCGCCGCATC GATCGCCCTG 
CCCCTGGGCG CCTACCAGCT CTGGCGCCGC CCCCGCGGCG ACGCCCAGCA CCGCCTCATC
GGGCGCGTCT GGGCGGTGCT GATGCTGTAC GTGGCGGCCA GCTCCTTCGG CATCACCGGG
CTGAACGGCT CGTCCTGGAG CGTGCTGCAC GCCCTGTCGG GCGCGACGAT CGTCAGCGTC
GTCGCCGGCG TGTGGGCGAT CCGCCGGGGC AACTTGCGCG GCCACCTCGG CTCGATGCGG
GGAGCCTGGT TCGGTCTGCT CGGCGCCTTC GTGTTCGCCG TGGCCGTGCC GGCCCGCCAC
ATCCCGCAGC TCGCCGTGCA TGACCCCGCG GCGCTGACGC GGTCGGTGGT GCTGGTGGCC
ACGGCGGCGG GGTTCGTGGT GCTGGCGGGG CGGTTCAGTG GGCGGCGGAG CGAGGCCACA
GCGCGGCCCA CATCCCGCTG A
 
Protein sequence
MDTTWTTLLV THTLAASIAL PLGAYQLWRR PRGDAQHRLI GRVWAVLMLY VAASSFGITG 
LNGSSWSVLH ALSGATIVSV VAGVWAIRRG NLRGHLGSMR GAWFGLLGAF VFAVAVPARH
IPQLAVHDPA ALTRSVVLVA TAAGFVVLAG RFSGRRSEAT ARPTSR