Gene Ksed_22080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_22080 
Symbol 
ID8373711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2285960 
End bp2286967 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content76% 
IMG OID644992450 
ProductABC-type Fe3+-siderophore transport system, permease component 
Protein accessionYP_003149956 
Protein GI256825996 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.170733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.158837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTCGC ACGTCACGTC GCTCGGCCAC GGCCGCCGGC TCGCGCTCCT GCTGGGGCTC 
GGACTGGCGG TCGTGGCCGT GGCCTGCTTG GCCTCCCTCG CCGTCGGGGC CACCGTGGTG
CCGCTGGCCC ACGTCTGGGA GACGCTGACC GGCAGCGCGC CCCACGGCAT CGTCGAGGCA
CGTCTGGACC GCACGGCGCT GGGTGTCGTC GTGGGGGCCG CGATGGGGTG TGCGGGCGCC
GCGATGCAGG CGCTCACCCG CAACCCGCTG GCCGACCCGG GCATCCTCGG CGTGAACGCC
GGGGCCGCGC TCGCCATCGT GCTGGGACTG GCCACCGGGC TGCTGACCGC GCAGACGCAG
TACGTGTGGT TCGCCCTGGC GGGGGCGGCG GTGGCCACCA CGGTGGTCTA CGGCATCGCC
TCGATGGGGC CCGGAGGCGC CCAGCCGGTG ACGCTCACCA TCGCCGGGGC CGCCTTCGCG
GCGACCGCGA CCAGCCTGGG CGCGGGGCTG CTGGTGGTGG ACCTCGCGGC GCTGGACGTG
TTCCGCGTGT GGCAGGTGGG CACCGTGGCC GGGCGCGACC TGGCCCTGCT CGGCTCGGTG
GCGCCGGTGC TGCTCGTCGG CTTCCTGCTG ACCCTGCCGG CCGGCGGGTG GCTCAACACG
CTCGGGCTGG GGGACGACAT GGCCCGCGGG CTGGGGCAGC GTGTCTGGCT GGTGCGCCTC
GTGGTGGCGG TCGGCGCGGT GTGCCTGTGC GCCGCGGGGA CCGCGCTGGC CGGGCCGGTG
GCCTTCGTGG GGCTGGTGGT GCCGCACGTG GTGCGCCTGC TGACCGGCCC CGACGAGCGG
CGCGTGATGC TGGGCTCGGC CCTCTTCGGA GCCGCCCTGG TGGTGGGCGC CGACACCATC
GGCCGCGTGG TGCTGCCCCC CACCGAGGTG CAGGTCGGCA TCATGACCGC CGTGATCGGC
GCCCCCGTCC TCATCGCCCT GGTGCGCACC CAGCGGGTGA CCGCATGA
 
Protein sequence
MSSHVTSLGH GRRLALLLGL GLAVVAVACL ASLAVGATVV PLAHVWETLT GSAPHGIVEA 
RLDRTALGVV VGAAMGCAGA AMQALTRNPL ADPGILGVNA GAALAIVLGL ATGLLTAQTQ
YVWFALAGAA VATTVVYGIA SMGPGGAQPV TLTIAGAAFA ATATSLGAGL LVVDLAALDV
FRVWQVGTVA GRDLALLGSV APVLLVGFLL TLPAGGWLNT LGLGDDMARG LGQRVWLVRL
VVAVGAVCLC AAGTALAGPV AFVGLVVPHV VRLLTGPDER RVMLGSALFG AALVVGADTI
GRVVLPPTEV QVGIMTAVIG APVLIALVRT QRVTA